SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene21655

Length: 781 nt

Origin of reads: Biogeco2 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene21655

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	heterotrophic ferredoxin 2 [Helianthus annuus]	-	-	2.99878e-43	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	ferredoxin- chloroplast	-	-	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	2Fe-2S ferredoxin, iron-sulphur binding site	IPR006058	-	-
Sma3	Beta-grasp domain	IPR012675	-	-
Sma3	Ferredoxin [2Fe-2S], plant	IPR010241	-	-
Sma3	2Fe-2S ferredoxin-type domain	IPR001041	-	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
140	12			87	0.992554
144	75	12		12	0.975346
145	12			25	1.0
146			12	87	0.992554
147			12	87	0.992554
148			12	87	0.992554
149			12	87	0.992554
169		23	76		1.0
175		76	23		1.0
177		23	76		1.0
178		23	76		1.0
184		76		23	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain