SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene21597

Length: 1092 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene21597

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-galactosidase n=1 Tax=Picea sitchensis RepID=B8LLU8_PICSI	-	-	89%
FL-Next	sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	beta-galactosidase 1-like	-	-	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Beta-galactosidase.	EC:3.2.1.23	-	0.0	77%

Source	KEGGs	Term	Identity
Blast2go	Galactose metabolism	00052	77%
Blast2go	Other glycan degradation	00511	77%
Blast2go	Glycosaminoglycan degradation	00531	77%
Blast2go	Sphingolipid metabolism	00600	77%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	77%
Blast2go	Metabolic pathways	01100	77%

Source	GOs	Term	Type	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	77%
Blast2go	beta-galactosidase activity	GO:0004565	Molecular Function	77%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	77%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	D-galactoside/L-rhamnose binding SUEL lectin domain	IPR000922	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Glycoside hydrolase, family 35	IPR001944	-	-
Sma3	Glycoside hydrolase, family 2, N-terminal	IPR006104	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain