SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene21529

Length: 983 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene21529

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RL74_RICCO	-	-	2.99878e-43	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	protein phosphatase 2c	-	-	0.0	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	86%

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Small GTPase superfamily	IPR001806	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	RNA polymerase sigma factor 54, interaction	IPR002078	-	-
Sma3	Small GTPase superfamily, Rab type	IPR003579	-	-
Sma3	Small GTP-binding protein domain	IPR005225	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3		IPR013753	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-
Sma3	DNA-directed DNA polymerase, family B, conserved site	IPR017964	-	-

Full-Lengther Next Prediction

SNPs (tot: 51)

Position	A %	C %	G %	T %	Probability
332	66	33			0.997452
335	66	33			0.997452
337		66		33	0.997452
338	66		33		0.997452
340	66	33			0.997452
341		33	66		0.997452
342	66			33	0.997452
346			33	66	0.997452
347	66	33			0.997452
349			33	66	0.997452
353		33		66	0.997452
354			66	33	0.997452
432		25	75		0.996473
433			25	75	0.996473
438	83	16			0.994512
439		16	83		0.994512
440	66	16			0.988813
444	16		83		0.994512
445		16		66	0.988813
447			66	33	1.0
448	66		16	16	0.988813
449	66		16	16	0.988813
450		83	16		0.994512
451	16	83			0.994512
452		16		83	0.994512
453			16	83	0.994512
454		83		16	0.994512
455	16	83			0.994512
456	16	83			0.994512
551		71	28		1.0
552		71		28	1.0
555		71	28		1.0
560			28	71	1.0
561	71	28			1.0
563	71			28	1.0
564	71	28			1.0
568	14	85			0.993533
607	87	12			0.992554
608			12	87	0.992554
610		12		87	0.992554
613			12	87	0.992554
614	12			87	0.992554
615		12	87		0.992554
619	87		12		0.992554
620	87		12		0.992554
621	87	12			0.992554
623	87		12		0.992554
625	87	12			0.992554
627		12		87	0.992554
630		12		87	0.992554
631	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain