SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene20839

Length: 748 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene20839

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj\|BAB09703.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAK76628.1\| unknown protein [Arabidopsis thaliana] gb\|AAL85038.1\| unknown protein [Arabidopsis thaliana] gb\|AAM67289.1\| DNA d	-	-	3.0e-18	87%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	dna-directed rna polymerases and iii kda polypeptide	-	-	3.03202e-30	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	DNA-directed RNA polymerase II, core complex	GO:0005665	Cellular Component	3.03202e-30	91%
Blast2go	DNA-directed RNA polymerase IV complex	GO:0000418	Cellular Component	3.03202e-30	91%
Blast2go		GO:0080137	Cellular Component	3.03202e-30	91%

Source	InterPros	Term	Type	e value	Identity
Sma3	RNA polymerase Rbp10	IPR006591	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
52	7	92			1.0
61	7			92	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain