SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene20699

Length: 744 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene20699

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	GLU n=1 Tax=Gossypium hirsutum RepID=E7CQZ9_GOSHI	-	-	4.0e-24	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	glucan endo- -beta-glucosidase	-	-	0.0	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	68%

Source	InterPros	Term	Type	e value	Identity
Sma3	X8	IPR012946	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
234		83		16	0.994512
235	66		16	16	0.988813
236	83	16			0.994512
237		16	83		0.994512
238	66	16		16	0.988813
239			16	83	0.994512
240	66	16		16	0.988813
242		16	83		0.994512
243			83	16	0.994512
244		16		83	0.994512
245	66		16	16	0.988813
246		83	16		0.994512
248		16	83		0.994512
249	83			16	0.994512
251	16			16	0.988813
253	16	66		16	0.988813
337	88		11		0.923564
341	11		88		0.923564
343		88		11	0.923564
405	50		50		1.0
434		11		88	0.999952
436		88		11	0.999952
437	82	11		5	0.999919
438	82		11	5	0.999919
441	11		88		0.999952
442		11		88	0.999952
443	82	17			1.0
444	88			11	0.999952
446	82		11	5	0.999919
448	82	11			0.999919
456		82	5	11	0.999919
459	82		11		0.999919
515		75		25	1.0
521		21	78		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain