SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene19496

Length: 831 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene19496

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	L.esculentum protein with leucine zipper n=1 Tax=Solanum lycopersicum RepID=Q40156_SOLLC	-	-	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	36%
Blast2go	exocyst complex component	-	-	62%

Source	GOs	Term	Type	Identity
Blast2go	extracellular vesicular exosome	GO:0070062	Cellular Component	62%
Blast2go	plasma membrane	GO:0005886	Cellular Component	62%
Blast2go	cytosol	GO:0005829	Cellular Component	62%

Source	InterPros	Term	Type	e value	Identity
Sma3	Exo70 exocyst complex subunit	IPR004140	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWM1

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 292 aas, your sequence is shorter than subject: 276 - 647

Fln protein: S*PWLSLSFIWFDVPSEASSYLEAVGDLQNMIAKLNLTPDDRKDFACLDRAQNVLQQAMARLEEELRMLLEKHSESVDPDWLYDPISQPSFSSSNNDEKASHTSAEDEGDEEDLPVAQPVTDLNFTIDMLPSEVVADLNRIVKCMVGAGYMAECCHVYVRIRRMFLEESVFRLGFEKQSIEEVQKMEWEVLEVEISKWMQVMKVTVHVFFTSERKLCERVFLDLPSAAETCFVELARGVMVQLLNFAEAVVISRRSPEKLFRILDMYETLRDLLPE

Protein Length: 277

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGCTTCATTTGGTTTGATGTGCCCAGTGAGGCTTCTTCCTATCTTGAGGCTGTTGGTGATCTGCAAAACATGATAGCCAAGCTGAACTTGACACCAGATGATCGAAAGGATTTTGCATGTTTGGATCGTGCGCAGAATGTCCTCCAGCAGGCCATGGCTCGCCTTGAAGAGGAGTTAAGGATGCTTTTAGAAAAACACAGTGAATCAGTTGATCCGGACTGGCTTTACGATCCGATTTCTCAGCCTTCCTTTAGCAGCTCTAATAACGATGAAAAGGCCTCTCACACTTCTGCTGAGGATGAAGGTGATGAGGAGGATTTACCTGTCGCACAGCCAGTCACTGATTTGAACTTTACTATTGATATGCTGCCTTCTGAGGTTGTTGCCGATCTTAACCGAATTGTCAAGTGTATGGTGGGAGCAGGGTATATGGCAGAATGCTGCCATGTTTATGTTAGAATTAGAAGAATGTTTCTGGAGGAAAGTGTATTTAGACTGGGTTTTGAAAAGCAAAGTATAGAAGAAGTACAAAAGATGGAATGGGAAGTTCTTGAGGTGGAGATTTCAAAGTGGATGCAGGTTATGAAAGTCACTGTGCATGTGTTCTTTACAAGTGAACGGAAACTCTGTGAGAGAGTCTTTCTGGACCTTCCTTCTGCCGCCGAGACTTGCTTTGTAGAGCTTGCCAGAGGAGTGATGGTTCAGCTACTGAACTTTGCTGAAGCTGTTGTAATCAGTCGTAGGTCTCCTGAAAAGCTCTTCAGAATTTTGGATATGTATGAAACTTTGCGGGATCTTCTTCCTGAAA

Fln Alignment:

Contig19496___EASSYLEAVGDLQNMIAKLNLTPDDRKDFACLDRAQNVLQQXXXXXXXXXXXXXXKHSESVDPDWLYDPISQPSFSSSNNDEKASHTSAEDEGDEEDLPVAQPVTDLNFTID-MLPSEVVADLNRIVKCMVGAGYMAECCHVYVRIRRMFLEESVFRLGFEKQSIEEVQKMEWEVLEVEISKWMQVMKVTVHVFFTSERKLCERVFLDLPSAAETCFVELARGVMVQLLNFAEAVVISRRSPEKLFRILDMYETLRDLLPE
A9NWM1_______________DLESYLAAVDQLRNNVEFFSSNKSFKSSDGVLTNANNLLAKAMLKLEEEFKQLLSTYSKVVEPERLFECLPNSLRPSSGSPANQGDPNGRKISHHEQ--IANGTEGSTYTIPTFIPPRIIPQLHDLVRRMVEAGHQQQCLKIYRDTRACVLEQSLRKLGVEKLTKDDVQKMQWEVLEGKIGNWIHFMRIAVKLLFAGERKVCDQIFEDLDPLGNQCFAEVTMSSVIMLLSFGEAIAKSKRSPEKLFVLLDMYETMRELLPE

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
184			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain