SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene19314

Length: 1107 nt

Origin of reads: Inia v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene19314

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ADP-ribosylation factor [Medicago sativa] emb\|CAI29265.1\| ADP-ribosylation factor 1 [Medicago truncatula]	-	-	99%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	adp-ribosylation factor	-	-	98%

Source	GOs	Term	Type	Identity
Blast2go	protein ADP-ribosylation	GO:0006471	Biological Process	98%
Blast2go	vesicle-mediated transport	GO:0016192	Biological Process	98%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	98%
Blast2go	intracellular	GO:0005622	Cellular Component	98%

Source	InterPros	Term	Type	Identity
Sma3		IPR006688	-	-
Sma3	Small GTPase superfamily, ARF/SAR type	IPR006689	-	-
Sma3	Small GTP-binding protein domain	IPR005225	-	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
175		25		75	0.996473
192	75		25		0.996473
239			83	16	0.994512
242	83			16	0.994512
243	83			16	0.994512
246	16			83	0.994512
247	83		16		0.994512
248		83	16		0.994512
249		16	83		0.994512
250		16		83	0.994512
253		83		16	0.994512
307	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain