SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene19021

Length: 450 nt

Origin of reads: Uagpf v2

UniGene Fasta

>sp_v2.0_unigene19021
CGTCGTGACCTTGGCTGTCACTCAGGAAACAGAAATCAAAGGATATCGCGTTCCAAAGGGTTGGAAGGTGGTTGCATGTACTACAGCCGTAAATCTTGACCCATCTATACATTTTGACCCCTTATCTTTTAATCCATGGAGATGGCAGAAAAGTACGTGGAATCGAAATCATTTTCAAGCTTTTGGAGGAGGGCTTAGATATTGCTTGGGATCGGAATTAGCCAAACTGGAAATGGGAGTGTTTCTGCATCATCTCGTCACAAAATTCAGATGGGAGCAAGCATATGGATGCAAAGAAGCAATAGTCCGCTGTCCGGTTGTGCTCTTTCAAAATGGTTATCCGATCAACCTGACTAAGCGAATGGAACCTTCTCGTCCATGTTGATGAACTATAGAATAGTGGAAGTACTAACGACAGCGGAATGCTAATTGCTGTATTATATTTCAGTA

Ace file of the UniGene sp_v2.0_unigene19021

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana] gb\|AAR24666.1\| At1g12740 [Arabidopsis thaliana] dbj\|BAD44087.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEE28919.1\| cytochrome P450, family 87, subfamily A, polypeptide 2	-	-	6.0e-25	46%
FL-Next	tr=Cytochrome P450 90A20; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	45%
Blast2go	cytochrome p450	-	-	3.04951e-33	67%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWM7

Fln msg: your sequence is shorter than subject: 128 - 487

Fln protein: VVTLAVTQETEIKGYRVPKGWKVVACTTAVNLDPSIHFDPLSFNPWRWQKSTWNRNHFQAFGGGLRYCLGSELAKLEMGVFLHHLVTKFRWEQAYGCKEAIVRCPVVLFQNGYPINLTKRMEPSRPC*

Protein Length: 129

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGAAACAGAAATCAAAGGATATCGCGTTCCAAAGGGTTGGAAGGTGGTTGCATGTACTACAGCCGTAAATCTTGACCCATCTATACATTTTGACCCCTTATCTTTTAATCCATGGAGATGGCAGAAAAGTACGTGGAATCGAAATCATTTTCAAGCTTTTGGAGGAGGGCTTAGATATTGCTTGGGATCGGAATTAGCCAAACTGGAAATGGGAGTGTTTCTGCATCATCTCGTCACAAAATTCAGATGGGAGCAAGCATATGGATGCAAAGAAGCAATAGTCCGCTGTCCGGTTGTGCTCTTTCAAAATGGTTATCCGATCAACCTGACTAAGCGAATGGAACCTTCTCGTCCATGTTGA___TGAACTATAGAATAGTGGAAGTACTAACGACAGCGGAATGCTAATTGCTGTATTATATTTCAGTA

Fln Alignment:

Contig19021___ETEIKGYRVPKGWKVVACTTAVNLDPSIHFDPLSFNPWRWQ---KSTWNRNHFQAFGGGLRYCLGSELAKLEMGVFLHHLVTKFRWEQAYGCKEAIVRCPVVLFQNGYPINLTKR
A9NWM7_______________DVEIKGFNIPQDWLVFPCFRAVHLDQELYSDARKFNPWRWQGNHPSTSSGTVFTPFGGGPRLCPGYELARVEISVFLHHMVTLFSWEVVE--EDKLIFFPTTRTVKRYPINLTRR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain