SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene18807

Length: 964 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene18807

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Thaumatin-like protein L2 n=3 Tax=Pinus monticola RepID=D3IZ06_PINMO	-	-	78%
FL-Next	tr=Thaumatin-like protein L6; Pinus monticola (Western white pine) (Strobus monticola).	-	-	80%
Blast2go	thaumatin-like protein	-	-	77%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Aminotransferase, class-II, pyridoxal-phosphate binding site	IPR001917	-	-
Sma3	Thaumatin, pathogenesis-related	IPR001938	-	-
Sma3	GNS1/SUR4 membrane protein	IPR002076	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Thaumatin, conserved site	IPR017949	-	-

Full-Lengther Next Prediction

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
5			87	12	0.992554
130	40			60	1.0
131			46	53	1.0
363	87		12		0.992554
370	87			12	0.992554
375	66	25	8		1.0
380	72		27		1.0
381	72			27	1.0
382		72	27		1.0
385		90		10	0.90298
386			70	30	1.0
390	70		30		1.0
394		42	14	42	1.0
395		66	33		1.0
396	50		50		1.0
397		50	50		1.0
398			50	50	1.0
399		50	50		1.0
400	50		33		1.0
401		50	16	33	1.0
410		14		85	0.993533
414	85		14		0.993533
415	85			14	0.993533
417	14		85		0.993533
419		11	22	66	0.999999
420	66			11	0.999999
422		22	77		0.999999
424	66	11		22	0.999999
425	66			11	0.999999
427	22			77	0.999999
429	11	88			0.923564
431		66		22	0.999999
436		75	25		1.0
437	75			25	1.0
438	75	25			1.0
460	85		14		0.999981
470	85			14	0.999981
472	85		14		0.999981
473	85	14			0.999981
475		85	14		0.999981
477		14	85		0.999981
478	14		85		0.999981
479	85	14			0.999981

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain