SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene18661

Length: 684 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene18661

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI	-	-	81%
FL-Next	sp=Cytochrome P450 716B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	cytochrome p450 716b2-like	-	-	77%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Hemocyanin, copper-type	IPR000896	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Cytochrome P450, B-class	IPR002397	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	HAT dimerisation	IPR008906	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
37	33	66			0.997452
39	33			66	0.997452
48		33		66	0.997452
51		33	66		0.997452
53			33	66	0.997452
54			66	33	0.997452
58	33	66			0.997452
59			33	66	0.997452
60		66	33		0.997452
100	66	33			0.997452
111		33		66	0.997452
141	75		25		0.996473
150		75		25	0.996473
151	75		25		0.996473
152		75	25		0.996473
153	75	25			0.996473
154	75			25	0.996473
156	75			25	0.996473
157	75	25			0.996473
161		75		25	0.996473
162	25	25	50		0.995533
164	25		75		0.996473
210	75		25		0.996473
211	75			25	0.996473
231	25			75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain