SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene18529

Length: 1585 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene18529

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI	-	-	93%
FL-Next	sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	fructose-bisphosphate aldolase	-	-	88%

Source	InterPros	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase, class-I	IPR000741	-	0.0	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NSH4

Fln msg: your sequence is longer than subject: 414 - 364

Fln protein: MPRVGFATSLCAKLSRDLIRCQRTRPQTYSGLQHLLVESIGRSSKRITKMTSRTLSGNSYYGKYAEELIETANYIATPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFTTPGALQYLSGVIFFEETLYQSTTSGKLFVQVLQEAGVVPGIKVDKGTVDLAGTNGETTTQGLDGLAQRCQQYYKAGARFAKWRAVLKIGPSEPSELSIEQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIHKCAAVTEKVVAAVYKALNDHHVLLEGTLLKPNMVTPGTDGPKVPPQQIAEHTVRAFQRTVPAAVPGIVFLSGGQSEEEATLHLNAINARKTQKPWTLSFSFGRALQQSTLKTWGGKAENLGAAQKAFLARCKANSEATLGKYAGGAGAGITTESLHVKDYKY*

Protein Length: 415

Fln nts: CACTCTCTCCGGAAATTCTTACTACGGCAAATACGCTGTAATGAACTATGTCACAGAGGTATTCAAATCCTGGTCAAATCCCTGAAAGTGTCGTGTCGAGAAGTACTAAAATCCTCCGAGGTGTCCA_-_ATGCCAAGAGTGGGGTTTGCTACCTCTCTCTGCGCTAAACTGAGCAGGGATTTGATCAGGTGCCAAAGAACCCGGCCACAAACATATAGTGGTCTTCAACATCTTCTTGTGGAGAGCATCGGTCGGTCATCGAAGCGGATTACAAAAATGACTAGTCGCACTCTCTCCGGAAATTCTTACTACGGCAAATACGCTGAGGAGTTGATTGAGACTGCCAATTACATTGCAACACCTGGCAAAGGTATCCTTGCAGCGGATGAGAGTACAGGAACCATTGGGAAGCGCCTGTCGAGCATCAACGTGGAGAATGTAGAGGCCAATCGTAGGGCGCTTCGAGAATTGCTCTTTACAACTCCTGGTGCTCTGCAGTATTTGAGTGGAGTTATTTTCTTTGAAGAAACTCTTTACCAGAGCACAACTAGTGGAAAACTTTTTGTCCAGGTCCTTCAGGAAGCAGGAGTGGTGCCCGGTATCAAAGTGGACAAGGGAACAGTAGATTTGGCTGGTACAAATGGGGAAACAACCACACAGGGATTAGATGGGCTTGCTCAAAGGTGCCAGCAGTATTACAAGGCTGGTGCAAGGTTTGCTAAATGGAGGGCAGTATTAAAGATTGGCCCAAGTGAGCCCTCAGAGCTTTCAATTGAACAGAATGCTCAAGGCCTGGCTCGTTATGCAATAATTTGCCAAGAGAATGGTCTGGTTCCGATCGTAGAACCTGAAATTTTGACCGATGGGTCTCATGATATTCATAAATGTGCTGCAGTTACTGAAAAAGTTGTTGCAGCTGTCTACAAAGCTTTGAATGACCATCATGTCCTTTTGGAGGGTACTCTGCTGAAACCCAACATGGTAACGCCTGGGACAGATGGTCCTAAAGTTCCTCCACAGCAAATCGCTGAACACACTGTAAGGGCATTCCAAAGGACCGTTCCAGCTGCAGTTCCTGGCATAGTGTTTCTCTCTGGTGGGCAGAGTGAAGAAGAGGCCACTTTGCACTTGAATGCAATAAATGCACGCAAAACTCAGAAGCCATGGACATTGTCCTTTTCTTTTGGACGAGCGCTGCAGCAGAGCACTCTCAAGACGTGGGGTGGGAAAGCAGAGAATCTCGGAGCTGCACAGAAGGCATTTCTTGCTCGTTGCAAGGCCAATTCTGAAGCAACTCTCGGCAAATATGCTGGAGGTGCTGGTGCTGGGATTACCACGGAAAGCCTACATGTTAAAGATTACAAATACTGA___TTTTTATAATTTAGAATGAAGCCATGAACTCCACTGTAATAGTGATGACCCTATGTTTAGAAGCTTCAGAGGCTATTAGGGAGATAGATTAATACTACTAGGTTAGTGGGTAAAATAAAGTATGTTGATAGAGAAAATGTGACTGAAGTAAAGATTATTATTTTTCTACAGTACTGTAGTGAAGTTGGTTGAGGAATAAAATAGATTATTCTTGAC

Fln Alignment:

Contig18529___MTSRTLSGNSYYGKYAEELIETANYIATPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFTTPGALQYLSGVIFFEETLYQSTTSGKLFVQVLQEAGVVPGIKVDKGTVDLAGTNGETTTQGLDGLAQRCQQYYKAGARFAKWRAVLKIGPSEPSELSIEQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIHKCAAVTEKVVAAVYKALNDHHVLLEGTLLKPNMVTPGTDGPKVPPQQIAEHTVRAFQRTVPAAVPGIVFLSGGQSEEEATLHLNAINARKTQKPWTLSFSFGRALQQSTLKTWGGKAENLGAAQKAFLARCKANSEATLGKYAGGAGAGITTESLHVKDYKY
A9NSH4_______________MTGRTLSGNSYYGKYSEELIATANYIATPGKGILAADESTGTIGKRLSSINVENVEVNRRSLRELLFTTPGALQYLSGVIFFEETLYQSTASGKPFVEVLQEAGVVPGIKVDKGTVDLAATNGETTTQGLDGLAQRCQQYYKAGARFAKWRAVLKIGPTEPSELSIEQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIHKCAAVTENVVAAVYKALNDHHVLLEGTLLKPNMVSPGTDGPKVPPEEIAEHTVRALQRTVPAAVPGIVFLSGGQSEEEATLNLNAINACKTKKPWTLSFSFGRALQQSTLKTWAGKAENLGAAQKAFLARCKANSEATLGKYAGGAGAGLATESLHVKDYKY

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
579	80		20		0.995493
835	76		23		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain