SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16988

Length: 1666 nt

Origin of reads: Inia v1 Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene16988

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gb\|AAF02143.1\|AC009853_3 putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] dbj\|BAC42699.1\| putative beta-1,3-glucanase precursor [Arabidopsis thaliana] gb\|AAO64098.1\| putative g	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	o-glycosyl hydrolases family 17 protein	-	-	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	73%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	73%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	Ribosomal protein S7	IPR000235	-	-
Sma3	Glycoside hydrolase, family 17	IPR000490	-	-
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	X8	IPR012946	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Ribosomal protein S2, conserved site	IPR018130	-	-

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: D5AAN5

Fln msg: Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 388 - 462

Fln protein: VGEPCRLKNEDIANVSANQSFADKWVKNNVVYFYPATRINIVLVGNEILSDYSNNQTWYQLVPAMLRIRRALLRYKLHHVKVGTPLAMDVLNTSFPPSSGAFRDDVAETVMKPMLEFLTRTRSYFFIDVYPYFAWSSDPTNISLEYANFGDHDKNYTDPNGLVYTNLLDQQLDAVVAAMSKLGYEDIRLIIAETGWPNAGDLNQLGANIFNSAHYNRRLIRRMVTDPPLGTPRRPNQFIPTYIFSLFNEDQKPGPGTERHWGLLYPNGTRVYEIDLTGELQDSEYKPLPPPPPPYTGKLWCVVDANANVSSLPSAINYACGQGNNTCASIQPGKPCYQPNTVIDHASYAFNSYWQQFKNSGATCYFNGAATLVTQDPSRGSCTYPFT*

Protein Length: 389

Fln nts: TAAATTCCATTACCAATAGAGGGCTTTAATCATTATTATAATAGTGCCCAAACTCTGTAGAAACACTGCAGATCCAAGGGCTTGTATGTTCAAGACGAGAATATAAATCCTTATCCGCAACAGAACTCTGAACAATAATAACATATACACATTGTACATATACCCTAACCCTAGTGTATATGCCATGAGGTAACCCTACCTGTTAAAAATCAACTGGAGCTGCTCTACATGTCGGCCCTGAGTTGGGGAACCGTGCAGACTTAAGAACGAAGATATTGCCAATGTCTCGGCCAACCAGTCATTTGCAGACAAATGGGTGAAGAATAATGTTGTTTACTTCTATCCTGCAACCAGGATCAATATAGTCCTGGTGGGGAATGAAATTTTATCAGACTACTCCAACAACCAGACCTGGTACCAGCTAGTTCCCGCTATGCTGAGAATCAGGCGAGCTCTACTTAGATATAAGCTGCATCATGTCAAGGTAGGAACCCCTTTGGCTATGGATGTGCTCAACACTTCATTTCCTCCATCATCTGGTGCTTTTCGGGATGATGTTGCGGAAACTGTCATGAAACCAATGCTCGAGTTTCTGACTAGAACGAGATCCTACTTTTTTATTGATGTGTATCCTTACTTTGCTTGGTCTTCTGATCCTACGAATATTTCTTTGGAATATGCCAATTTTGGGGATCATGATAAAAACTACACCGATCCTAATGGCCTTGTGTATACCAATTTGCTGGACCAGCAGCTTGATGCGGTTGTAGCTGCGATGAGCAAACTGGGTTATGAGGACATTAGGTTAATCATAGCTGAAACTGGGTGGCCCAATGCCGGTGACCTTAATCAGTTGGGTGCCAACATCTTTAATTCAGCCCATTATAACCGGCGGCTCATAAGGAGAATGGTTACAGATCCTCCCCTGGGAACCCCTCGCAGGCCCAATCAATTCATCCCCACATACATTTTTTCATTGTTTAATGAGGATCAAAAGCCTGGACCGGGAACTGAGAGACATTGGGGTTTGTTGTATCCAAATGGAACCAGGGTTTATGAGATTGATCTCACTGGCGAGCTCCAGGATTCGGAGTATAAGCCTCTCCCTCCTCCACCTCCACCCTACACTGGCAAATTGTGGTGTGTTGTAGATGCTAATGCAAATGTTTCTTCCTTGCCGTCTGCTATTAATTATGCTTGCGGTCAGGGAAACAACACCTGCGCTTCCATCCAGCCAGGGAAGCCTTGTTATCAGCCTAACACGGTTATTGATCATGCATCCTATGCCTTCAACAGTTATTGGCAGCAATTCAAGAACTCAGGGGCCACTTGTTACTTTAATGGAGCTGCAACACTAGTCACACAGGACCCCAGTCGTGGAAGTTGCACATACCCATTCACTTGA___CTGATCTGCAGTGTGGAAGCAGACGTTTTTTCTCCATCTGACCTATTTGCAAAACTGTCTCCAGATGTCTGGCTTTGTTGAATGCAGTATTTTTGTCAGTTCTAGTCGTTCAGAAGATTAGACTACTGATTCAATTCATTGTAGAAGCACTAAATTTTTTATCTTAAAGGAACTTGTTACATAGCATCCTTGTAATTGATAGCAGGGATTCCTTATATGTATATAGTTATCTATCAGTTTATAGATCCCATATTTCTAGGG

Fln Alignment:

Contig16988___LKNEDIANVSANQSFADKWVKNNVVYFYPATRINIVLVGNEILSDYSNNQTWYQLVPAMLRIRRALLRYKLHHVKVGTPLAMDVLNTSFPPSSGAFRDDVAETVMKPMLEFLTRTRSYFFIDVYPYFAWSSDPTNISLEYANFGDHDKNYTDPNGLVYTNLLDQQLDAVVAAMSKLGYEDIRLIIAETGWPNAGDLNQLGANIFNSAHYNRRLIRRMVTDPPLGTPRRPNQFIPTYIFSLFNEDQKPGPGTERHWGLLYPNGTRVYEIDLTGELQDSEYKXXXXXXXXYTGKLWCVVDANANVSSLPSAINYACGQGNNTCASIQPGKPCYQPNTVIDHASYAFNSYWQQFKNSGATCYFNGAATLVTQDPSRGSCTYPF
D5AAN5_______________VKNEDIANVSSNQSFANKWVKNNVVYFYPATRINIILVGNEILSDYSNNQTWYQLVPAMLRIRRALLRYKLHHIKVGTPLAMDVLNTSFPPSSGIFRDDVAETVMKPMLEFLSRTRSYFFIDVYPYFAWSSDSNNISLEYANFGDHDKNYTDPNGLVYTNLLDQQLDAVIAAMSKLGYEDIRLVIAETGWPNAGDLNQLGANIFNAAHYNRRIIRRMLADPPLGTPRRPNQFIPTYIFSLFNENQKTGLGTERHWGLLYPNGSRLYEIDLTGELQDSEYKPLPPPPPPYKGKLWCVVDANANVSALPSAITYACSQGNNTCVAIQPGKPCYQPNTVIDHASYAFNSYWQQFKNSGGTCYFNGAATLVTKDPSSKICRYPF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain