SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16742

Length: 661 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene16742

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	translocase inner membrane subunit 23-2 [Arabidopsis thaliana] gb\|AAG51855.1\|AC010926_18 inner mitochondrial membrane protein; 26940-26374 [Arabidopsis thaliana] gb\|AAA57314.1\| inner mitochondrial membrane protein [Arabidopsis thaliana] gb\|AAK68832.1\| inn	-	-	2.0e-17	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Blast2go	mitochondrial import inner membrane translocase subunit tim23-like	-	-	2.86686e-36	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	mitochondrial inner membrane	GO:0005743	Cellular Component	2.86686e-36	84%

Source	InterPros	Term	Type	Identity
Sma3	F-box domain, cyclin-like	IPR001810	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	IPR003397	-	-
Sma3	Mitochondrial inner membrane translocase complex, subunit Tim23	IPR005681	-	-
Sma3	Kelch repeat type 2	IPR011498	-	-
Sma3	Galactose oxidase, beta-propeller	IPR015916	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
493	55	45		1.0
644	30		70	1.0
645		70	30	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain