SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16711

Length: 746 nt

Origin of reads: Inia v1 Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene16711 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	GPI-anchored protein n=1 Tax=Ipomoea nil RepID=A2PZD8_IPONI	-	-	5.0e-35	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Blast2go	gpi-anchored protein	-	-	0.0	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	pollen tube	GO:0090406	Biological Process	0.0	68%

Full-Lengther Next Prediction

SNPs (tot: 52)

Position	A %	C %	G %	T %	Probability
177		33		66	0.997452
381	92			7	0.999532
383	7	92			0.999532
384	92	7			0.999532
391	7			92	0.999532
394		82	3		1.0
396	7	89	3		0.998606
398		89	10		1.0
401	92		7		0.999532
428		42		57	1.0
443	94	5			0.998894
450		3	90		0.997073
455	93	6			0.999264
458		6	93		0.999264
459	91	2			0.99441
461		94	5		0.998578
462	91		5		0.99441
464		5	94		0.998578
469	88		5		0.988099
484	87	5	2	2	0.907274
486		92	2		0.991359
487	87	2	5	5	0.9224
488	94		5		0.997984
489	94	5			0.997984
496	91	5		2	0.993509
499	91	5			0.99441
500	91		8		1.0
506	3	6	3	87	0.990219
507			9	90	1.0
508			6	93	0.999364
514	6			93	0.999364
608	84	10			0.999846
609		10	84		0.999846
611			88	11	0.999937
612	6	81			0.999943
614		87		12	0.999964
615		53	13	33	1.0
616	46	13	33		1.0
617	76		15	7	0.999983
618	23		46		1.0
620		20	70		0.999998
624	11		77	11	0.968132
625	11	77		11	0.968132
626	11	77	11		0.968132
627	77		22		0.999999
628	77		22		0.999999
631			22	77	0.999999
633	77			22	0.999999
634		77	22		0.999999
635			77	22	0.999999
636	77		22		0.999999
638			77	22	0.999999

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain