SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16455

Length: 1856 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene16455

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RY37_RICCO	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	66%
Blast2go	abscisic acid 8 -hydroxylase	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	(+)-abscisic acid 8'-hydroxylase.	EC:1.14.13.93	-	0.0	83%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Carotenoid biosynthesis	00906		0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	abscisic acid metabolic process	GO:0009687	Biological Process	83%
Blast2go	response to water deprivation	GO:0009414	Biological Process	83%
Blast2go	release of seed from dormancy	GO:0048838	Biological Process	83%
Blast2go	defense response to fungus	GO:0050832	Biological Process	83%
Blast2go	response to red or far red light	GO:0009639	Biological Process	83%
Blast2go	binding	GO:0005488	Molecular Function	83%
Blast2go	(+)-abscisic acid 8'-hydroxylase activity	GO:0010295	Molecular Function	83%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, B-class	IPR002397	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AC99

Fln msg: Separated hits, possible frame ERROR between 823 and 828, your sequence is longer than subject: 471 - 270

Fln protein: MNLVGYGLIFLVALVVIRLWRRPKSVGSGLLSLPPGSLGWPYIGETLQLYSQNPNVFFASKQRRYGDIFKTHILGCPCIMIASPEAARFVLVKQAHLFKPTFPRSKECMIGPQALFFHQGEYHAQLRKLVQRSFLPEAIRNIVPDIESLALNALSSWEGNTINTFQEMKGLSFQVALLSIFGRDEVFDREDLKQSYSIVHKGYNSMPINLPGTLFHRAMKARKHLSEILNQIIATRRANNVGKxxxLLGSLMQSTDGSSQTLTDDQIADNIIGVIFAAQDTTASVLTWIIKYLRDNPSFLEAVTAEQEAIRQSKGKENCLLTWEDTRKMPLTCRVIQETLRVASILSFTFREAVADVEYKGYLIPKGWKVLPLFRNLHHSPEFFPDPQKFDPSRFEVPQKPNTFMPFGSGAHSCPGNELAKLEMLIVIHHMTTKYRWDFVGTETGIQYGPFPVPMQGLPIKVSRRFPGSQ*

Protein Length: 472

Fln nts: CGTCGTGACCTTGGCTGTCACGTCATCATTTTACGAAGTCCAGTGTGTTGTTCTTCCCCTGCTCTGTAATTCCCCGAGAGAATCTGCTACG_-_ATGAATTTAGTAGGATATGGACTAATTTTCTTGGTGGCCTTGGTCGTTATACGGCTATGGCGCCGGCCTAAATCTGTTGGCAGCGGCTTGTTGAGCTTGCCCCCTGGTTCGCTGGGGTGGCCCTATATAGGGGAAACGCTGCAGCTCTACTCGCAGAATCCGAATGTCTTCTTCGCCTCCAAACAGAGAAGGTATGGGGACATTTTCAAGACCCATATATTGGGATGTCCATGTATTATGATAGCCAGTCCAGAGGCAGCCAGATTTGTTTTGGTGAAACAGGCTCATCTCTTCAAGCCCACGTTCCCAAGGAGCAAAGAATGCATGATTGGGCCCCAGGCACTCTTCTTTCACCAGGGAGAATACCATGCTCAACTGAGGAAACTGGTTCAGAGATCATTCCTTCCTGAGGCTATTAGAAACATTGTTCCGGACATTGAATCCCTTGCACTCAATGCTCTCTCTTCATGGGAAGGGAACACCATCAACACATTCCAGGAGATGAAAGGGCTTTCATTCCAAGTGGCACTGCTCTCCATATTTGGTAGAGACGAAGTATTTGACAGAGAAGATCTGAAGCAATCATATTCTATTGTTCACAAGGGATACAATTCCATGCCCATTAACCTTCCCGGGACCCTTTTCCACAGGGCAATGAAGGCCAGAAAACACCTCAGCGAAATACTGAACCAAATAATTGCTACACGGAGGGCCAATAATGTAGGTAAACAxxxxxxTTTGTTGGGTTCTCTGATGCAATCAACGGACGGAAGCTCACAGACCCTGACAGATGACCAGATAGCAGATAATATCATTGGAGTAATTTTTGCAGCCCAAGATACAACTGCCAGTGTCTTGACCTGGATTATCAAGTACCTGAGAGATAATCCATCATTTCTGGAGGCTGTCACGGCTGAACAAGAAGCCATTAGACAATCTAAAGGGAAGGAAAATTGCCTCCTGACTTGGGAAGATACCAGGAAAATGCCCTTAACATGCAGGGTTATTCAGGAGACACTGAGAGTGGCCTCAATATTATCCTTCACATTCAGAGAAGCAGTTGCAGACGTAGAATACAAAGGTTACCTTATACCAAAAGGATGGAAGGTCTTGCCGTTGTTCAGAAACCTTCATCATAGTCCAGAGTTTTTCCCTGACCCACAGAAGTTCGATCCTTCTAGATTTGAGGTACCTCAGAAGCCCAACACATTCATGCCTTTCGGTAGTGGGGCTCATTCCTGCCCTGGCAACGAACTCGCAAAGTTAGAAATGCTTATTGTCATTCATCACATGACCACAAAGTACAGGTGGGATTTTGTGGGGACAGAGACTGGAATTCAATACGGCCCCTTCCCTGTTCCAATGCAAGGATTACCCATCAAAGTCAGCCGTAGGTTCCCTGGATCACAGTGA___ATCATCAAGCCTCTCGATGAACGTCACTGCAACAGACGACACTGGTACTCTGGGGGAGCTAACTAATAGAGAGATATATGTATTAATATATTCTTTTGTTTTGGCATGGTTAAGCTATTATTATTGTTAGGAAGCACAATACACAAAGTGTATTCTGCTTGTCATGTAATACAATGTTTATGAGGAATCATAAGCAAAGGTGATTGAGGAATCATAAGCCAAAGGTGATTGCAAGCCTCTTTTCATTTACCAATGAATCAAAATTTTGCTCATATGTACCGTAACGCTGAGGATTCATAAGCTAAAGGTGGTTGTAATTCTCTATTCATTTATTAATGAATCAAAAATTTTGTT

Fln Alignment:

Contig16455___MPINLPGTLFHRAMKARKHLSEILNQIIATRRANNVGKQxxLLGSLMQSTDGS-SQTLTDDQIADNIIGVIFAAQDTTASVLTWIIKYLRDNPSFLEAVTAEQEAIRQSKGKENCLLTWEDTRKMPLTCRVIQETLRVASILSFTFREAVADVEYKGYLIPKGWKVLPLFRNLHHSPEFFPDPQKFDPSRFEVPQKPNTFMPFGSGAHSCPGNELAKLEMLIVIHHMTTKYRWDFVGTETGIQYGPFPVPMQGLPIKVSRRFPG
D5AC99_______________MPLNLPGTPFHKAMKARKRLSKILSKIIAQRRSSTVWKExxLLETLMSSEEESCGQPLTYDQIADNIIGVIFAAQDTTASVLTWILKYLRDHAELLEAVTAEQEAIHEAKGEG--YLTWADTKKMPLTSRVIQETLRIATILSFTFREAVQDVEYKGYLIPKGWKVMPLFRNIHHSPDFYPDPQKFDPSRFEVPPKPNTFLPFGNGAHSCPGSELAKLEMLILIHHLTTKYRWDILGSENGIQYGPFPVPKQGLPVKVTRKNGG

SNPs (tot: 42)

Position	A %	C %	G %	T %	Probability
74		85	14		0.993533
75		85		14	0.993533
78	85			14	0.993533
82	85	14			0.993533
83	87	12			0.992554
85		87		12	0.992554
86			12	87	0.992554
90	87			12	0.992554
92	12		87		0.992554
93	87	12			0.992554
95		12	87		0.992554
110	81	18			0.999994
343		87		12	0.992554
348	12	12	75		0.975346
352			85	14	0.993533
470			16	83	0.994512
471			83	16	0.994512
472	83	16			0.994512
474			83	16	0.994512
475	83		16		0.994512
477	83	16			0.994512
486		16	83		0.994512
487	83			16	0.994512
488		16	83		0.994512
674		85		14	0.993533
675	85		14		0.993533
677		14		85	0.993533
679	85			14	0.993533
681	85		14		0.993533
682			14	85	0.993533
684		85	14		0.993533
687		14		85	0.993533
689		14	85		0.993533
690	14			85	0.993533
818			77	22	0.999999
819		22		77	0.999999
821	77	22			0.999999
822	77			22	0.999999
864	88		11		0.923564
1030	20	80			0.995493
1244		85		14	0.993533
1580		15	84		0.999986

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain