SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16364

Length: 1068 nt

Origin of reads: Inia v1 Biogeco2 v2 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene16364 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytosolic ascorbate peroxidase n=4 Tax=Magnoliophyta RepID=B3TM10_ELAGV	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	ascorbate peroxidase	-	-	91%

Source	InterPros	Term	Type	Identity
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Plant ascorbate peroxidase	IPR002207	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Full-Lengther Next Prediction

SNPs (tot: 73)

Position	A %	C %	G %	T %	Probability
303	85		14		0.993533
402		88		11	0.923564
403			11	88	0.923564
404	11	88			0.923564
405			11	88	0.923564
410	88	11			0.923564
412	11			88	0.923564
413	11	77	11		0.968132
414	11		11	77	0.968132
415			11	88	0.923564
417	11			88	0.923564
418	77	11			0.968132
428	12			87	0.992554
429			12	87	0.992554
430		87	12		0.992554
434	87	12			0.992554
435		25	75		1.0
436	12		87		0.992554
437	12			87	0.992554
438	85	14			0.993533
443		83	16		0.994512
445			16	83	0.994512
449	16			83	0.994512
450		16		83	0.994512
451	16			83	0.994512
452			16	83	0.994512
453		16	83		0.994512
455	16		83		0.994512
456	16			83	0.994512
457			16	83	0.994512
458			16	83	0.994512
462	87		12		0.992554
464	87		12		0.992554
465	12		87		0.992554
536	25			75	1.0
537			25	75	1.0
540	25		75		1.0
541	25	75			1.0
542	75		25		1.0
545	75	25			1.0
547		25		75	1.0
548		75	25		1.0
672		83	16		0.994512
673	16	83			0.994512
674			16	83	0.994512
678	83	16			0.994512
680			16	83	0.994512
681	83	16			0.994512
682		16	83		0.994512
686			16	83	0.994512
692	83	16			0.994512
694		16		83	0.994512
695	83		16		0.994512
712		80	20		0.995493
715			20	80	0.995493
716		20	80		0.995493
719	20	80			0.995493
720		80	20		0.995493
721		80	20		0.995493
725	80	20			0.995493
726	80		20		0.995493
727	20		40	40	1.0
729		40	60		1.0
734		50	50		1.0
735	50		50		1.0
737	50			50	1.0
738		25	50		0.995533
740		75		25	0.996473
741	50			50	1.0
742	75			25	0.996473
746	25	50	25		0.995533
748	25	75			0.996473
752	25		50		0.995533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain