SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16189

Length: 849 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene16189

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Hydrophobic protein LTI6A, putative	-	-	6.0e-11	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	rare cold inducible protein	-	-	5.70655e-18	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to cold	GO:0009409	Biological Process	5.70655e-18	92%
Blast2go	hyperosmotic salinity response	GO:0042538	Biological Process	5.70655e-18	92%

Source	InterPros	Term	Type	e value	Identity
Sma3	Proteolipid membrane potential modulator	IPR000612	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
536		20		80	0.995493
537			80	20	0.995493
539	20			80	0.995493
687	20			80	0.995493
689	80			20	0.995493
833		50		50	1.0
834		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain