SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene16185

Length: 1067 nt

Origin of reads: Inia v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene16185

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	CBL-interacting protein kinase 22 [Populus trichocarpa] gb\|ABK95707.1\| unknown [Populus trichocarpa]	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	75%
Blast2go	cbl-interacting protein kinase 2	-	-	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity	GO:0016740	Molecular Function	0.0	72%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	NAF domain	IPR004041	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	Ribosomal protein S14, conserved site	IPR018271	-	-
Sma3	NAF/FISL domain	IPR018451	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWA3

Fln msg: your sequence is shorter than subject: 282 - 426

Fln protein: ENGDMKICDFGLSALPEQFRQDGLLHTACGTPAYVAPEIITMKGYDGAKADIWSCGIILFVLRAGYLPFQDANLMALYRKIYKGDFKYPPWFSSDLRRLVFRLLDHNPQTRITVPQLMEVPWFRQGFKPPQAENVDVGLLDDVESAFFVPKPPRFNAFDIISLSSAFNLSGMFEEKIVKQQLWFTSIQPASTIISKLEEIAKVLRFSVKKTEDCKIKLQGPELGLKGRLCIDAEIFEITPSLFIVQLHKGGGDTVEYSKLCSQELRRGLKDIVWIWDCNSE*

Protein Length: 283

Fln nts: GCGAGAACGGGGACATGAAGATCTGCGACTTTGGGCTCAGCGCACTGCCGGAGCAATTTAGACAAGACGGCCTTCTCCACACAGCGTGCGGCACGCCGGCGTACGTGGCCCCGGAGATCATAACGATGAAGGGCTACGATGGTGCAAAGGCCGACATCTGGTCTTGTGGGATCATACTGTTCGTGCTCAGGGCAGGTTACTTGCCATTCCAGGACGCGAATCTGATGGCACTGTATAGGAAAATCTACAAGGGCGACTTCAAGTACCCGCCCTGGTTCTCCTCCGACCTCCGGCGGCTCGTCTTCCGACTGCTGGACCACAATCCCCAGACGAGGATCACCGTTCCGCAGCTCATGGAGGTCCCCTGGTTCCGGCAGGGCTTCAAACCCCCACAAGCCGAAAATGTCGATGTTGGCCTCCTTGACGATGTCGAGTCGGCGTTCTTTGTTCCGAAGCCGCCCCGCTTCAACGCCTTCGACATAATCTCGCTGTCGTCGGCGTTCAATCTGTCGGGGATGTTCGAGGAGAAGATCGTGAAGCAGCAGTTGTGGTTCACATCAATTCAACCGGCGTCGACCATAATATCAAAACTGGAGGAAATCGCCAAAGTGTTGAGATTCAGCGTCAAGAAGACTGAGGATTGCAAAATAAAGCTTCAGGGTCCGGAGCTGGGGTTGAAGGGTCGTTTGTGTATCGATGCCGAGATTTTTGAAATCACGCCATCGCTTTTCATCGTTCAGCTTCACAAGGGCGGGGGAGATACGGTCGAGTACAGTAAGCTGTGCAGCCAAGAGCTGAGACGGGGTCTCAAAGATATTGTCTGGATATGGGATTGCAATAGTGAATAG___ATCATAACGTATATCGTCTGAGCTATGGTCTAGCAGTTCACCTGTGGCAGTTCTTATTACACAGGGATGGTGTCTTGGACATTGCCTGACATCGAACTGGGAATTCTCCGAATGACATGGTTCAAAACTCATCGTTCATTAACCTTAATTCGGAGGGTCCCCGAATGGTGCAGGTCCTTCGCACAGACAAAGTTGAACCTTAAATGGTTTGAACTTTCG

Fln Alignment:

Contig16185___ENGDMKICDFGLSALPEQFRQDGLLHTACGTPAYVAPEIITMKGYDGAKADIWSCGIILFVLRAGYLPFQDANLMALYRKIYKGDFKYPPWFSSDLRRLVFRLLDHNPQTRITVPQLMEVPWFRQGFKPPQA-ENVDVGLLDDVESAFFVPKPPRFNAFDIISLSSAFNLSGMFEEKIVKQ-QLWFTSIQPASTIISKLEEIAKVLRFSVKKTEDCKIKLQGPELGLKGRLCIDAEIFEITPSLFIVQLHKGGGDTVEYSKLCSQELRRGLKDIVWIWDCNSE
A9NWA3_______________ENGDMKVSDFGLSALPEQFRQDGLLHTACGTPAYVSPEVITKKGYDGAKADIWSCGVILFVLMAGYLPFLDANLMVMYKKIYKGDFKCPPWFSSEVRRLVVRLLDPNPRTRITVPQLMEVPWFRRGFKRPQAGKDVDVGLLEDVDSAFCAPKPACLNAFDIISLSPGFNLSGLFKDDVVKQEESRFTSTQPASSIMSKLEEIASLFRFSFKKSKDCKVKLQGSEQGRKGQLSIDAEIFEVTPSLFVVELRKTGGDSLEYSKFYSQDLKPGLKDIVWTWDGNSQ

SNPs (tot: 4)

Position	C %	T %	Probability
706	11	88	0.923564
938	90	10	0.90298
941	90	10	0.90298
981	42	57	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain