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Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PSI1

Fln msg: query STOP codon is far from subject stop. Distance to subject end: 29 aas, your sequence is shorter than subject: 331 - 404

Fln protein: RRDLGCHSGVESGMVQEVFFGPVLSANLGQAPARQAALGAGIPNSVVCTAINKVCASGMKATTLAAQSIQLGSNDIVVAGGKESMSNAPYYLPDARKGYRLGHGSLVDGMMKDGLWDVYNDIGMGVCAELCADNHNITREEQDNHAVQSFERGIDAQNSGAFAWEIVPVEVSGGRGKPSTVVDKDEGLGKFDAAKLRKLRPAFKEGGSVTAGNASTISDGAAALVLVSGEKALELRLQVIAKITGYADAAQAPELFTTAPALAIPKAISRAGLEASQIDYYEINEAFSVVALANQKILNLKPETVNVHGGAVSLGAIHLGAVGLALWSHF*

Protein Length: 332

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTGTTGAATCCGGAATGGTCCAAGAAGTATTTTTTGGACCTGTTTTGAGTGCAAACCTGGGTCAAGCTCCTGCTAGACAGGCAGCACTGGGTGCAGGGATACCTAATTCTGTGGTATGCACTGCAATCAACAAAGTCTGTGCATCAGGAATGAAAGCAACAACGTTAGCAGCCCAGAGTATCCAGTTAGGAAGCAATGACATTGTTGTGGCTGGAGGCAaGGAAAGCATGTCAAACGCTCCTTATTACCTCCCTGATGCCAGAAAGGGGTATCGACTGGGACACGGATCTCTTGTCGATGGAATGATGAAAGACGGACTCTGGGATGTTTACAATGACATTGGCATGGGAGTATGTGCAGAGTTATGTGCAGATAATCATAACATAACAAGAGAAGAACAGGACAACCATGCAGTTCAGAGTTTCGAACGTGGAATTGATGCCCAGAACAGTGGTGCTTTTGCATGGGAAATAGTGCCGGTTGAGGTTTCCGGAGGTAGAGGAAAGCCTTCCACAGTTGTTGACAAAGATGAAGGCTTGGGGAAGTTTGATGCTGCAAAACTAAGAAAACTTAGACCAGCATTTAAAGAAGGTGGAAGTGTCACCGCGGGTAATGCTTCAACAATTAGTGATGGAGCAGCTGCTCTAGTGTTGGTGAGTGGAGAGAAGGCTTTGGAACTAcGATTACAAGTTATAGCAAAGATCACAGGATATGCTGATGCTGCACAGGCACCTGAGCTGTTTACAACTGCACCGGCTCTAGCCATACCAAAAGCTATTTCAAGGGCAGGCTTGGAGGCTTCACAAATTGACTACTATGAGATCAATGAAGCATTTTCTGTTGTGGCTCTTGCGAACCAGAAGATACTTAATCTCAAGCCTGAAACTGTAAATGTACATGGAGGAGCTGTGTCtTTGGGGGCAATCCACTTGGGTGCAGTGGgGCTaGCATTATGGTCACACTTTTAG___GGGTATTGAGGCAAAGGAATGGGAAATATGGAGTCGCAGGAGTTTGCAATGGTGGTGGTGGGGCATCTGCAGTGGTTATAGAGTGCATTGATCACTTAAAAGAAGTACGTGCCTCCCTGTGAAGACATATCGATGGAAATGCCATGTTTGTAGGAGACATAATTTAGATTTTTTTATTATAATAACCAAGTCAGTCAGATCCTTGTGACTCGTGGTGTCTATTCAAGTATAATAATTACTATCATTATTGATTTGGTGTGATGTTGATGACCTGCCTTTCCTGTGACACATTTCACCCTTGAGGATGGAAAAGGTTTTGTTTCAAAGGCTCAAGTGATGATTGTTTGAGTTGGAAAAGCAACAGGTTTCCAGATGTAGCGTATTGGTAACTTATATGCTTTAGTAACTTACA

Fln Alignment:

Contig15654___SGVESGMVQEVFFGPVLSANLGQAPARQAALGAGIPNSVVCTAINKVCASGMKATTLAAQSIQLGSNDIVVAGGKESMSNAPYYLPDARKGYRLGHGSLVDGMMKDGLWDVYNDIGMGVCAELCADNHNITREEQDNHAVQSFERGIDAQNSGAFAWEIVPVEVSGGRGKPSTVVDKDEGLGKFDAAKLRKLRPAFKEGGSVTAGNASTISDGAAALVLVSGEKALELRLQVIAKITGYADAAQAPELFTTAPALAIPKAISRAGLEASQIDYYEINEAFSVVALANQKILNLKPETVNVHGGAVSLG
C0PSI1_______________AGVESGMVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCASGMKATTLAAQSIQLGNNDIVVAGGMESMSNAPYYLPDARKGYRLGHGSLVDGMMKDGLWDVYNDYGMGVCGELCADSHNISREEQDNHAVQSFERGINAQNSGAFAWEIVPVEVSGGRGKPSTVVDKDEALGKFDAAKLRKLRPAFKEGGTVTAGNASTISDGAAALVLVSGEKALELGLQVIAKITGYADAAQAPELFTTAPSLAIPKAISRAGLEASQIDYYEINEAFSVVALANQKILDLKPETVNVHGGAVSLG