SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene15639

Length: 814 nt

Origin of reads: Inia v1 Biogeco1 v2 Biogeco2 v2 Biogeco3 v1 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene15639 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	LEA [Pinus halepensis]	-	-	5.0e-29	71%
FL-Next	tr=LEA; Pinus halepensis (Aleppo pine).	-	-	0.0	96%
Blast2go	aba-responsive lea-like protein	-	-	3.19298e-36	91%

Source	InterPros	Term	Type	e value	Identity
Sma3	Late embryogenesis abundant protein, LEA-5	IPR004926	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
455		13		86	0.999973
456		13	86		0.999973
484		90	10		0.90298
485	10	90			0.90298
487	10			90	0.90298
488			10	90	0.90298
489		10	90		0.90298
490		10		90	0.90298
491	10			90	0.90298
494			10	90	0.90298
495	10			90	0.90298
497	12	87			0.992554
500	12	75	12		0.975346
502		87		12	0.992554
503		85	14		0.993533
505		16		83	0.994512
524		66	16	16	0.988813
525			16	66	0.988813
529	50	50			1.0
531		50		50	1.0
534	40	60			1.0
535	40	60			1.0
537		66		33	1.0
539	33	66			1.0
542	28	71			1.0
583		7		92	0.999664
740		79	20		1.0
758	98	1			0.908873
759	6		93		1.0
769			81	18	1.0
782	5		93	0	1.0
788	1	4		94	1.0
791	1	2		95	0.991384
797	3	96			1.0
799	0	3	0	95	1.0
800	2		0	96	1.0
801		3	96		1.0
802		4		95	1.0
803		4	95		1.0
806		88	3	2	1.0
807	0	96	2		0.987741
809	3	91	0		0.998266
810	97			2	0.953846

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain