SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene15299

Length: 1055 nt

Origin of reads: Inia v1 Biogeco1 v2 Biogeco2 v2 Biogeco3 v1 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene15299 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ubiquitin carrier protein n=1 Tax=Arachis hypogaea RepID=Q5UAG0_ARAHY	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	ubiquitin-conjugating enzyme-like protein	-	-	94%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ubiquitin-conjugating enzyme/RWD-like	IPR016135	-	0.0	-
Sma3	Ubiquitin-conjugating enzyme, E2	IPR000608	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
640		97	2		0.936149
641	2			97	0.936149
642		97	2		0.936149
647	2	0	97		0.978408
700		95	0		1.0
708	96	0	0		0.924647
709	0	93		1	1.0
802	97		0		0.971208
862	86	12			1.0
864		12		87	1.0
865		7	0	91	1.0
871	97	2			0.944212
882		4		96	0.999968
884		2		97	0.967822
885	2	97			0.971188
887	94	5			1.0
888	95	4			0.999986
889		4	1	93	0.999943
890	87	11		1	1.0
891	81	15		3	1.0
893	1	1	85	10	1.0
899		13	86		1.0
900	85	15			1.0
901		15	84		1.0
902	92	7			1.0
903	8	2	78	10	1.0
907	95	5			0.997749
909		8	91		1.0
910		8		91	1.0
911	72	28			1.0
912	72	8		4	1.0
914	4	40	50	4	1.0
916	85	15			1.0
917		10		89	0.999919
947	14		85		0.993533
948		14	85		0.993533
949	14			85	0.993533
950			85	14	0.993533
958	16			83	0.994512
959	16			83	0.994512
960	16			83	0.994512
963		83		16	0.994512
964	16			83	0.994512
965	16	33	50		1.0
966		16	16	16	0.988986
967		40		40	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain