SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene15163

Length: 920 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene15163

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Activating signal cointegrator, putative n=1 Tax=Ricinus communis RepID=B9R996_RICCO	-	-	53%
FL-Next	tr=Activating signal cointegrator, putative; Ricinus communis (Castor bean).	-	-	58%
Blast2go	protein	-	-	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Zinc finger, C2HC5-type	IPR009349	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9R996

Fln msg: your sequence is shorter than subject: 301 - 413

Fln protein: WAEAKDVAKGKGNAARKKKGGKVISLAEAAKGSIVLQSGQPCDCQARRHKLIANCLSCGKIICEQTGEGPCSFCGALVLREGSNYAGLGAVAFPVSEGEAAAEAFKNRLVDYDRNAAERTVVIDDQSDYYDVEGNAWISEEEKQLLRKKQEEIEEADRARRNKLVVTLDLVGRKVVMTEQDAAEMVTQSGILRPTFDSQDKSCNRIKANPNIRDLPVFVDTREPGRSKRSQPYKNSKMPVRAQTGVCFEITGRVQHDDPLVQTFSSGGYTAETLVEGPWKAPNISMQFCNPEGEDNECFS*

Protein Length: 302

Fln nts: ATGGGCAGAAGCAAAGGATGTCGCAAAGGGGAAAGGTAATGCTGCCAGGAAGAAGAAAGGGGGTAAAGTGATTTCACTTGCAGAAGCTGCAAAAGGCTCAATTGTCCTCCAAAGTGGTCAACCTTGTGATTGCCAAGCTCGTAGGCATAAGCTTATAGCAAATTGTCTGTCCTGTGGCAAGATCATTTGTGAACAGACAGGAGAAGGCCCTTGCAGCTTTTGTGGTGCACTTGTGTTGCGTGAAGGTTCTAATTATGCAGGGCTTGGCGCGGTTGCATTCCCTGTGTCTGAAGGAGAAGCTGCAGCAGAGGCATTTAAGAATAGGCTTGTTGACTATGACCGTAATGCGGCTGAGCGGACAGTTGTGATTGATGATCAGAGTGATTATTATGATGTTGAGGGAAATGCATGGATTTCAGAAGAGGAAAAGCAACTATTGCGAAAGAAACAGGAAGAAATTGAAGAAGCTGATCGAGCTCGTCGAAATAAACTTGTTGTCACCTTAGATTTAGTTGGTCGTAAGGTTGTGATGACTGAGCAAGATGCAGCGGAGATGGTGACACAAAGCGGTATACTGCGGCCCACTTTTGATTCTCAAGATAAAAGTTGCAATCGCATAAAGGCAAATCCAAATATAAGAGATCTGCCAGTTTTTGTAGATACCCGTGAGCCAGGTCGTTCAAAGAGATCACAGCCTTATAAAAATAGTAAAATGCCAGTAAGAGCCCAGACTGGTGTGTGCTTTGAGATAACTGGAAGAGTGCAGCATGATGATCCATTGGTGCAGACATTTTCCTCAGGTGGATACACGGCAGAAACTCTTGTTGAAGGTCCTTGGAAAGCTCCAAATATCAGCATGCAATTTTGTAACCCCGAAGGCGAAGATAATGAATGTTTTAGTTGA___TGCTTAACAAAACCTA

Fln Alignment:

Contig15163___VISLAEAAKGSIVLQSGQPCDCQARRHKLIANCLSCGKIICEQTGEGPCSFCGALVLREGSNYAGLGAVAFPVSEGEAAAEAFKNRLVDYDRNAAERTVVIDDQSDYYDVEGNAWISXXXXXXXXXXXXXXXXADRARRNKLVVTLDLVGRKVVMTEQDAAEMVTQSGILRPTFDSQDKSCNRIKANPNIRDLPVFVDTREPGRSKRSQPYKNSKMPVRAQTGVCFEITGRVQHDDPLVQTF
B9R996_______________VVSLAEAAKGSIVFQQGKPCSCQARRHRPVSNCLSCGKIVCEQEGEGPCSFCGALVLKEGSSYAGLEGSLEPISDAEAAAEAFAKRLVEYDRNAAARTTVIDDQSDYYEIEGNSWLSKEEKELLRRKQKEIEEAEKAKRNRVIVTFDLVGRKVLVNQDEVSELELENRILRPP-DEKEREVDRIKPNPTLKIQPIFMD---PGPTKK--PVKAKQTDNGRPNGLCLEVTGRVQHDKDALKYF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain