SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene14806

Length: 749 nt

Origin of reads: Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene14806

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Androgen induced inhibitor of proliferation (As3) / pds5, putative n=1 Tax=Ricinus communis RepID=B9T579_RICCO	-	-	61%
FL-Next	tr=Androgen induced inhibitor of proliferation (As3) / pds5, putative; Ricinus communis (Castor bean).	-	-	61%
Blast2go	sister chromatid cohesion protein pds5	-	-	74%

Source	GOs	Term	Type	Identity
Blast2go	mitochondrion	GO:0005739	Cellular Component	74%
Blast2go	nucleus	GO:0005634	Cellular Component	74%
Blast2go	chloroplast	GO:0009507	Cellular Component	74%

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	AT hook, DNA-binding motif	IPR017956	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
341		33		66	0.997452
499	75			25	0.996473
533	25	75			0.996473
534	25			75	0.996473
536	75		25		0.996473
537			75	25	0.996473
751	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain