SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene14641

Length: 474 nt

Origin of reads: Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v2.0_unigene14641
TACTGTCCGCTCCAAGGGCACCGTCGTCTGCATCGGTCTCCCCGCCAATGCCAACCTCTCCGCTCCCGTCTTCGACACCGTCATCCGCATGATCAACATCAAGGGCAGCTACGTCGGCAACCGCGCCGACTCCGCCGAGGCCATTGAGTTCTACCGCCAGGGCCTCATCACCGTCCCCTTCAAGACTGTTGGCCTCAGCGAGCTCCAGAGCGTCTACGAGCTCATGAAGCAGGGCGCCATTGCCGGTCGCTATGTCGTCGACACCAGCCGATAAGCGCATTCTATCTGCTTTGTAACATGGGAGGCGAACCGCGCAGCGGGCCCCCGAGATGAGAGGAGTTTGGGTGTGAGTTGCTTGGGAATTATGCGGTGGTGTTGAGAATAGTAGCCAGATTGATTATTGGTTAACTACCTTGTTGTATTATGGAAATGAGTACCACAGCATCAATATAAACGGAACTAAGCTTCCGAAGT

Ace file of the UniGene sp_v2.0_unigene14641 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	alcohol dehydrogenase I [Metarhizium anisopliae] gb\|EFZ01400.1\| alcohol dehydrogenase I [Metarhizium anisopliae ARSEF 23]	-	-	5.0e-37	85%
FL-Next	tr=Putative uncharacterized protein; Zea mays (Maize).	-	-	0.0	80%
Blast2go	alcohol dehydrogenase i	-	-	1.12104e-44	89%

Source	InterPros	Term	Type	Identity
Sma3	Alcohol dehydrogenase superfamily, zinc-type	IPR002085	-	-
Sma3	Alcohol dehydrogenase, zinc-type, conserved site	IPR002328	-	-
Sma3	Alcohol dehydrogenase, C-terminal	IPR013149	-	-
Sma3	Alcohol dehydrogenase GroES-like	IPR013154	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B4G1S2

Fln msg: your sequence is shorter than subject: 91 - 353

Fln protein: TVRSKGTVVCIGLPANANLSAPVFDTVIRMINIKGSYVGNRADSAEAIEFYRQGLITVPFKTVGLSELQSVYELMKQGAIAGRYVVDTSR*

Protein Length: 92

Fln nts: TACTGTCCGCTCCAAGGGCACCGTCGTCTGCATCGGTCTCCCCGCCAATGCCAACCTCTCCGCTCCCGTCTTCGACACCGTCATCCGCATGATCAACATCAAGGGCAGCTACGTCGGCAACCGCGCCGACTCCGCCGAGGCCATTGAGTTCTACCGCCAGGGCCTCATCACCGTCCCCTTCAAGACTGTTGGCCTCAGCGAGCTCCAGAGCGTCTACGAGCTCATGAAGCAGGGCGCCATTGCCGGTCGCTATGTCGTCGACACCAGCCGATAA___GCGCATTCTATCTGCTTTGTAACATGGGAGGCGAACCGCGCAGCGGGCCCCCGAGATGAGAGGAGTTTGGGTGTGAGTTGCTTGGGAATTATGCGGTGGTGTTGAGAATAGTAGCCAGATTGATTATTGGTTAACTACCTTGTTGTATTATGGAAATGAGTACCACAGCATCAATATAAACGGAACTAAGCTTCCGAAGT

Fln Alignment:

Contig14641___VRSKGTVVCIGLPANANLSAPVFDTVIRMINIKGSYVGNRADSAEAIEFYRQGLITVPFKTVGLSELQSVYELMKQGAIAGRYVVDTSR
B4G1S2_______________IRSRGTVVCIGLPANAQFSAPVFDTVVRMISIKGSYVGNRADTAEAIDFFRRGLIKVPFKTVGLSELNEVYKLMKAGQIVGRYVVDTSR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain