SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene14632

Length: 352 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene14632
CAATCCACTTGAGGAAGTTGTAAATCAGGTTGTGATGGTTGTAGTTAACAAGGTAGATGTTTGTGTCATGGATGCACGTCGGTCTCCCCTTGAAAGCCAAGTCGCCCCTGAATGGGGTTATGAAAAGGATAAATTATCAACAGGAAGACACCGGTTGTACTGGCAGGCATCTATTCCAGCCATGGGTCTGCAGACATATTACATTGCTAATGGTTTGGCTGATTGTGAGAAAGCTAAGCTAACAGATTTGAAGGTTTCTCATGGATTGCAATCATTCACTTGCCCTGCTCCATATAAATGCTCAAAATTGGAAGGTGATAATGCTGAGATAAAAAACAAGCATCAGACACTT

Ace file of the UniGene sp_v2.0_unigene14632

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mannosidase alpha class 2a, putative (EC:3.2.1.114); K01231 alpha-mannosidase II [EC:3.2.1.114]	-	-	7.0e-25	45%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	58%
Blast2go	alpha-mannosidase-like protein	-	-	9.89776e-31	70%

Source	ECs	Term	Type	e value	Identity
Blast2go	Alpha-mannosidase.	EC:3.2.1.24	-	9.89776e-31	70%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Other glycan degradation	00511		9.89776e-31	70%

Source	ECs	Term	Type	e value	Identity
AutoFact	Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase.	EC:3.2.1.114	-	7.0e-25	45%

Source	KEGGs	Term	e value	Identity
AutoFact	N-Glycan biosynthesis	00510	7.0e-25	45%
AutoFact	Various types of N-glycan biosynthesis	00513	7.0e-25	45%
AutoFact	Metabolic pathways	01100	7.0e-25	45%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein N-linked glycosylation	GO:0006487	Biological Process	9.89776e-31	70%
Blast2go	alpha-mannosidase activity	GO:0004559	Molecular Function	9.89776e-31	70%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	9.89776e-31	70%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 38, core	IPR000602	-	-
Sma3	Glycosyl hydrolases 38, C-terminal	IPR011682	-	-
Sma3	Glycosyl hydrolase, family 13, all-beta	IPR013780	-	-
Sma3	Glycoside hydrolase, family 38, central domain	IPR015341	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6HV68

Fln msg: Distance to subject end: 400 aas, your sequence is shorter than subject: 117 - 1149

Fln protein: NPLEEVVNQVVMVVVNKVDVCVMDARRSPLESQVAPEWGYEKDKLSTGRHRLYWQASIPAMGLQTYYIANGLADCEKAKLTDLKVSHGLQSFTCPAPYKCSKLEGDNAEIKNKHQTL

Protein Length: 118

Fln nts: CAATCCACTTGAGGAAGTTGTAAATCAGGTTGTGATGGTTGTAGTTAACAAGGTAGATGTTTGTGTCATGGATGCACGTCGGTCTCCCCTTGAAAGCCAAGTCGCCCCTGAATGGGGTTATGAAAAGGATAAATTATCAACAGGAAGACACCGGTTGTACTGGCAGGCATCTATTCCAGCCATGGGTCTGCAGACATATTACATTGCTAATGGTTTGGCTGATTGTGAGAAAGCTAAGCTAACAGATTTGAAGGTTTCTCATGGATTGCAATCATTCACTTGCCCTGCTCCATATAAATGCTCAAAATTGGAAGGTGATAATGCTGAGATAAAAAACAAGCATCAGACACTT

Fln Alignment:

Contig14632___NPLEEXXXXXXXXXXXXXXXXXXXARRSPLESQVAPEWGYEKDKLSTGRHRLYWQASIPAMGLQTYYIANGLADCEKAKLTDLKVSHGLQSFTCPAPYKCSKLEGDNAEIKNKHQTL
F6HV68_______________NPLEQTRNEVVMVVVNRPDVTVLASNWTCVKSQVSPEWQHDKSKIFTGRHRVHWKASVPAMGLETYYIAVGYVGCEKAKQAKLKFATKSNHLPCPAPYACSKLEGDTAEIQNRHQTL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain