SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene14481

Length: 624 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene14481

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	sp=Pumilio homolog 24; Arabidopsis thaliana (Mouse-ear cress).	-	-	52%
Blast2go	protein	-	-	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	RNA binding	GO:0003723	Molecular Function	0.0	72%
Blast2go	nucleolus	GO:0005730	Cellular Component	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Pumilio RNA-binding repeat	IPR001313	-	0.0	-
Sma3	Armadillo-like helical	IPR011989	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
57		33		66	0.997452
409	20			80	0.999996
520	80	20			0.995493
522			80	20	0.995493
523	80			20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain