SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene13999

Length: 924 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene13999

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mitotic cyclin a2-type [Glycine max]	-	-	6.0e-40	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	31%
Blast2go	protein	-	-	0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	cell cycle	GO:0007049	Biological Process	75%
Blast2go	cell division	GO:0051301	Biological Process	75%
Blast2go	nucleus	GO:0005634	Cellular Component	75%

Source	InterPros	Term	Type	Identity
Sma3	Cyclin, C-terminal	IPR004367	-	-
Sma3		IPR006670	-	-
Sma3	Cyclin, N-terminal	IPR006671	-	-
Sma3	Mannosyltransferase, DXD	IPR007704	-	-
Sma3	Cyclin-like	IPR013763	-	-
Sma3	Cyclin A/B/D/E	IPR014400	-	-
Sma3	Cyclin A, G2/mitotic-specific	IPR015453	-	-

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
140	16		83		0.994512
528	90			10	0.90298
557	90			10	0.90298
568	10			90	0.90298
587	90			10	0.90298
714		28	14	57	1.0
715	85		14		0.993533
716			14	85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain