SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene13917

Length: 967 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene13917

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF565 domain containing protein	-	-	6.0e-17	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	protein	-	-	0.0	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	nonphotochemical quenching	GO:0010196	Biological Process	0.0	77%
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Uncharacterised protein family Ycf20	IPR007572	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
452	16			83	0.994512
454	16	83			0.994512
456	83			16	0.994512
579	78	21			1.0
581		7	78	14	0.999974
586		16		83	0.999991
589			16	83	0.999991
592		16	83		0.999991
595			83	16	0.999991
621	12			87	0.992554
622		12	87		0.992554
624	87			12	0.992554
754	11		88		0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain