SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene13358

Length: 1915 nt

Origin of reads: Inia v1 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene13358

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Purple acid phosphatase 22 n=2 Tax=Arabidopsis RepID=PPA22_ARATH	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	66%
Blast2go	purple acid phosphatase	-	-	75%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	75%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	75%
Blast2go	Riboflavin metabolism	00740		0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	metal ion binding	GO:0046872	Molecular Function	75%
Blast2go	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	75%
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	75%

Source	InterPros	Term	Type	Identity
Sma3	Orn/Lys/Arg decarboxylase, major domain	IPR000310	-	-
Sma3	MIF4G-like, type 3	IPR003890	-	-
Sma3	Initiation factor eIF-4 gamma, MA3	IPR003891	-	-
Sma3	Fibronectin, type III	IPR003961	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Fatty acid hydroxylase	IPR006694	-	-
Sma3	Orn/Lys/Arg decarboxylase, C-terminal	IPR008286	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	-
Sma3	Purple acid phosphatase, N-terminal	IPR015914	-	-
Sma3	MIF4-like, type 1/2/3	IPR016021	-	-
Sma3	Ribosomal protein L30, conserved site	IPR018038	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LRS5

Fln msg:

Fln protein: MAPVSYKTLPNMGIGIFMILSCLAIYSEAGHYVRPHPRPIISTPSTTETDMDPEQVHISLVGSNSMRVTWMTAEDVPSLVEYGKSPGNYTSSAFGEISSNYWYLFYKSGYIHNVVIGPLEANTTYYYRCGGHGPDFKLKTPPSELPIVFSVAGDLGQTEWTKSTLQHINESYHDVFLLPGDLSYADNTQTLWDSFGRLVEPLASSRPWMVTEGNHEVETIILLMEHAFKSYNARWQMPYKESGSTSNLYYSFEVAGVHVIMLGSYANYGKDSDQYKWLQGDLGKVDRVKTPWIFVLLHAPWYNTNAAHEGEGEKMRVAMEPLLYAAKVDLVFAGHVHAYERFTHVYNNTADPCGPIYITIGDGGNREGLALDFKEPQSELSLFREASFGHGELTVYNATHTHWIWHRNEDVELVVSDEVWLTSLSNSANSCQKLQESSTSYDDEL*

Protein Length: 447

Fln nts: CATGAGGAATAAGTCTTATATATCGCTTATATGATGGGCACAGGGAGCGTTGAAATCGCTTGAGATAGGTGGAAACGTGCGGGCAACTAACGCTTTGAATTTATTTTTCGAACCCATTATTTTAATGCCTGAGCTCTTATTTAAGAACAGTAGGAACAAATGATACACAATTCAATTTCAGTCTCATGTATTGCACTGTGTGATAGATAAAGGGATTGAAGCTTTC_-_ATGGCTCCGGTTTCATATAAAACCCTGCCAAATATGGGCATCGGTATTTTTATGATCTTGTCTTGTTTGGCAATTTATTCAGAGGCGGGGCACTATGTTCGGCCCCATCCTCGTCCTATCATATCTACTCCTTCCACAACAGAAACGGACATGGATCCTGAGCAGGTTCATATTTCTCTGGTAGGAAGTAATTCTATGAGGGTAACGTGGATGACAGCGGAGGATGTACCTTCGTTGGTTGAATATGGAAAATCTCCGGGAAACTACACTTCTTCTGCTTTTGGGGAGATTTCTTCTAATTATTGGTATTTGTTCTACAAATCTGGCTACATTCATAACGTTGTGATTGGGCCACTTGAAGCGAATACTACCTACTATTATAGATGTGGAGGACATGGTCCGGATTTCAAGCTCAAGACACCACCGTCAGAGTTACCCATTGTTTTTTCTGTCGCAGGTGATTTGGGACAAACTGAGTGGACGAAATCAACTCTGCAACACATTAATGAGAGTTATCATGATGTTTTCCTTCTGCCTGGTGATCTCTCCTATGCTGACAACACCCAGACTCTGTGGGATTCATTTGGGAGGTTGGTGGAACCTCTGGCCAGCAGCAGGCCCTGGATGGTCACAGAAGGAAACCATGAGGTTGAAACAATTATCCTCCTGATGGAACATGCCTTTAAATCCTACAATGCTAGGTGGCAAATGCCATATAAAGAAAGCGGTTCCACTTCAAACTTGTATTACTCTTTTGAAGTTGCAGGAGTGCACGTTATCATGCTTGGTTCCTACGCTAATTATGGGAAGGATTCAGACCAATACAAGTGGCTGCAGGGTGATCTTGGAAAGGTAGATAGAGTGAAAACGCCCTGGATTTTTGTTCTGTTACATGCTCCCTGGTATAATACAAATGCTGCTCATGAGGGTGAGGGAGAGAAGATGAGAGTAGCCATGGAGCCTTTGCTTTACGCTGCCAAAGTGGATCTAGTTTTTGCAGGACATGTGCACGCTTATGAACGTTTTACTCATGTGTACAATAACACAGCTGATCCTTGTGGACCAATTTACATTACCATTGGAGATGGAGGAAACCGTGAAGGGCTTGCTTTAGATTTCAAGGAGCCACAATCTGAATTGTCTCTGTTCCGTGAAGCGAGCTTTGGACATGGTGAACTTACAGTATACAATGCAACACATACACATTGGATTTGGCATCGTAATGAAGACGTTGAGTTAGTGGTATCTGATGAAGTTTGGTTAACCAGTCTCAGCAATTCAGCAAACTCGTGTCAGAAATTACAGGAAAGTTCCACATCATATGATGACGAGCTATAA___GGAACCCATAAGTAAACGGATGAAGTCTTTTTTTAGCATTGAAGGCTGGGATTTCATTACAGGAATTGACCTCCAGACGAGAGATAACTATTTGCTTCTGATGAATGTTAAAATAGATTAGATAATAAGATGTGAGAGACTCCGGTATGTTAGCAGGTTGCGTAGTGAACAGCTTCAGAATCAAGTGGAGTGGGATGTGGAGATGAGTGCAAAACTTGCCCTGTATTTGTTACGACAAGATCCAGATCCAAAATATGGAAGGGACTGATTTTTAAAACAAATAAAATGTGTTAGGGTTTACATTTCTTGTATTAGAATGCGCAAAATTGTAATTAAATGCCACGTTAAAAC

Fln Alignment:

Contig13358___FMILSCLAIYSEA-GHYVRPHPRPIISTPSTTETDMDPEQVHISLVGS-NSMRVTWMTAED-VPSLVEYGKSPGNYTSSAFGEISSNYWYLFYKSGYIHNVVIGPLEANTTYYYRCGGHGPDFKLKTPPSELPIVFSVAGDLGQTEWTKSTLQHINESYHDVFLLPGDLSYADNTQTLWDSFGRLVEPLASSRPWMVTEGNHEVETIILLMEHAFKSYNARWQMPYKESGSTSNLYYSFEVAGVHVIMLGSYANYGKDSDQYKWLQGDLGKVDRVKTPWIFVLLHAPWYNTNAAHEGEGEKMRVAMEPLLYAAKVDLVFAGHVHAYERFTHVYNNTADPCGPIYITIGDGGNREGLALDFKEPQSELSLFREASFGHGELTVYNATHTHWIWHRNEDVELVVSDEVWLTSLSNSANSC
B8LRS5_______________FRLLCILIVISYASGSYVRPLPRSTLSVPLDTKSSSDPQQVHVSLSGNDNYMRISWMTKDDAVSSIVEYGTSSGKYTSSAEGE-NTNYRYLLYKSANVHHVVIGPLETGTLYYYRCGGNGAEYSFKTPPAQLPIAFAVVGDLGQTGWTTSTLQHVQQMNYDVLLLPGDLSYADYRQPLWDSFGRLVEPLASSRPWMVTQGNHEIEKIPLLVSTPFKAYNARWKMPYQESGSPSNLYYSFEVAGAHILMLGSYAEFGTDSDQYKWLQGDLSRVNRRKTPWLIALIHAPWYNTNTAHQGEGDDMKDAMEELLHAAKVDIVFAGHVHAYERFTRVFKNQPNPCGSVHITIGDGGNREGLASRYEDPPSGLSEFREASFGHGEFVIYNATHAHWTWHQNDDDESVVSDEVWINSLASVSNSC

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
185		87		12	0.992554
319	14	85			0.993533
321	85			14	0.993533
394	11			88	0.923564
396		88		11	0.923564
397	87		12		0.992554
405		75	25		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain