SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
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miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene13242

Length: 807 nt

Origin of reads: Biogeco3 v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene13242

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ribosomal protein S3 n=8 Tax=Pinaceae RepID=D2DWK4_9CONI	-	-	1.0e-33	74%
FL-Next	tr=Ribosomal protein S3; Abies holophylla (Neddle fir) (Manchurian fir). Mitochondrion.	-	-	0.0	96%
Blast2go	ribosomal protein s3	-	-	8.04738e-41	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	translation	GO:0006412	Biological Process	8.04738e-41	90%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	8.04738e-41	90%
Blast2go	rRNA binding	GO:0019843	Molecular Function	8.04738e-41	90%
Blast2go	small ribosomal subunit	GO:0015935	Cellular Component	8.04738e-41	90%
Blast2go	chloroplast	GO:0009507	Cellular Component	8.04738e-41	90%
Blast2go	mitochondrion	GO:0005739	Cellular Component	8.04738e-41	90%

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein L16	IPR000114	-	-
Sma3	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	IPR000440	-	-
Sma3	Ribosomal protein S3, C-terminal	IPR001351	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3		IPR008282	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-
Sma3	Ribosomal protein L10e/L16	IPR016180	-	-
Sma3	Ribosomal protein S14, conserved site	IPR018271	-	-
Sma3	Ribosomal protein S3, conserved site	IPR018280	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain