SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12665

Length: 801 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene12665

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Spindle assembly checkpoint component mad1, putative n=1 Tax=Ricinus communis RepID=B9SPB2_RICCO	-	-	8.0e-31	71%
FL-Next	tr=Spindle assembly checkpoint component mad1, putative; Ricinus communis (Castor bean).	-	-	0.0	71%
Blast2go	protein	-	-	2.65594e-35	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein glycosylation	GO:0006486	Biological Process	2.65594e-35	79%
Blast2go	mitotic cell cycle checkpoint	GO:0007093	Biological Process	2.65594e-35	79%
Blast2go	galactosyltransferase activity	GO:0008378	Molecular Function	2.65594e-35	79%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	2.65594e-35	79%
Blast2go	integral to membrane	GO:0016021	Cellular Component	2.65594e-35	79%
Blast2go	mitochondrion	GO:0005739	Cellular Component	2.65594e-35	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Mitotic checkpoint	IPR008672	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
602	12	12		75	0.975346
604		87	12		0.992554
605	87		12		0.992554

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain