SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12580

Length: 1612 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene12580

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: similar to putative calcium-dependent protein kinase CPK1 adapter protein 2 n=1 Tax=Vitis vinifera RepID=UPI000198302B	-	-	44%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	44%
Blast2go	uncharacterized protein loc100262595	-	-	66%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9SXM6

Fln msg:

Fln protein: MSGDTEKELLKAQIREMKDMWQVELTHRQAREDLLESELLEVKECLLSAGEREKNEVDHLRRRVKTANNLLSFLKSKARIMSMPGFAYTACGIKYEEGVGFVDKKGVPMGEWCKDPNISLFESSKVKGCGQNSDPKCEGDMVGPTEQSEEEYVEQIAMSVMLVNDVMEVLLKRTIIAETEIALERKKANVSQDQVKKKALQIENMWARVEEMENVAKGTSGVLKEMQQKLEHMEQETLRQRQRAAQNEQELSRVRHDFEVLRSNIDNLTGTRESLLSSEKRLQEMEKVLERLTSKAANLEGANKQKDREVRDLLKTNDGLKASLDIKEAELSAMREQCKLLTIQSQKLRDS*

Protein Length: 353

Fln nts: ATGGGGGCTTTTGAAGGATATGAAATGATAAACTGAAATGGGCGAATGTTCACGGTGGAATGCCAAGTATCGAATTGAACGGCTAATCTGCACGACTTGAACACCATTGTATTGAAAAATTCACAAGGGGAAACAAA_-_ATGAGTGGAGATACTGAAAAAGAGTTATTGAAGGCCCAAATCAGGGAGATGAAGGATATGTGGCAGGTGGAATTGACCCATAGACAAGCTCGAGAGGACCTTCTAGAATCAGAACTGTTGGAGGTGAAAGAATGTCTTTTGAGTGCTGGGGAAAGAGAGAAAAATGAAGTGGATCATCTTCGTCGGCGTGTCAAGACTGCAAATAATTTGTTGTCATTTTTGAAGTCCAAAGCAAGAATTATGTCTATGCCAGGTTTTGCATATACTGCATGTGGTATCAAATATGAAGAAGGTGTAGGATTTGTTGACAAAAAGGGTGTTCCCATGGGTGAGTGGTGCAAGGATCCTAACATTTCGCTATTTGAAAGTTCAAAGGTCAAAGGATGCGGCCAAAACTCAGATCCAAAATGTGAAGGGGACATGGTAGGCCCTACAGAACAGAGTGAAGAGGAGTATGTGGAACAGATAGCTATGTCTGTGATGTTAGTGAACGATGTGATGGAGGTGCTTCTTAAAAGGACTATTATAGCTGAGACAGAGATTGCATTAGAGAGAAAAAAGGCAAACGTAAGTCAGGATCAGGTGAAGAAGAAGGCACTGCAGATTGAGAACATGTGGGCACGAGTAGAAGAGATGGAGAATGTAGCCAAAGGAACCAGTGGGGTCCTAAAGGAAATGCAGCAGAAGCTTGAACATATGGAACAGGAGACCTTAAGGCAAAGACAGCGTGCTGCACAAAATGAGCAGGAACTGTCAAGGGTGAGGCATGATTTTGAGGTTTTACGGTCTAATATTGATAATCTAACTGGTACAAGGGAGTCTCTGTTGTCATCTGAGAAGCGACTCCAAGAAATGGAGAAAGTTTTGGAAAGGCTTACTTCCAAAGCTGCAAACTTGGAGGGTGCGAACAAACAAAAAGATAGGGAAGTCCGTGACCTTTTAAAAACTAACGACGGGTTAAAAGCATCCCTGGATATTAAGGAGGCAGAATTGTCAGCCATGAGAGAACAGTGCAAGCTCCTGACAATACAATCTCAGAAATTGAGAGATAGTTGA___TAAAATCATATCTAATAAGCTCCAATCAGAGCTGTGTAAATAAACGGTCTGCTCTTCGTTTGTTTTCAAAATTTTATTATTTTTGGTCTCAGTTATGAAGATCAGAATCAACAAAGCTAGGCGGAAGGTACTTCTCAACTTCTTTGAAATTAACCACCTCAGGTCTTAACATCTAGAGAGAGCCTCGTTTCTTTAGACGTGTTTGAAACTGGAACAATGGGAGTGATCAGGAAAGGAGGTAGATACTTGGAAGTCTTACATGAAGAGGGAACTTTGTTTCTGCAGGATGTCTTTGAAATTGGAACCATGGTAATAAACATTGTTTCTGCAGAATGTCTTTGAAATTGGAACCATGGTAATAAACAGGAAAGGAGGTAGATGTCTTTGGGAAAACACATTTTAATACACTGACATCCTTT

Fln Alignment:

Contig12580___DTEKELLKAQIREMKDMWQVELTHRQAREDLLESELLEVKECLLSAGEREKNEVDHLRRRVKTANNLLSFLKSKARIMSMPGFAYTACGIKYEEGVGFVDKKGVPMGEWCKDPNISLFESSKVKGCGQNSDPKCEGDMVGPTEQSEEEYVEQIAMSVMLVNDVMEVLLKRTIIAETEIALERKKANVSQDQVKKKALQIENMWARVEEMENVAKGTSGVLKEMQQKLEHMEQETLXXXXXXXXNEQELSRVRHDFEVLRSNIDNLTGTRESLLSSEKRLQEMEKVLERLTSKAANLEGANKQKDREVRDLLKTNDGLKASLDIKEAELSAMREQCKLLTIQSQKL
B9SXM6_______________DVDLSNLKSQLNDTHEIWKQEMERRQSQVDVLQAKLMEVKACIQGSEEDAKKELEVLWRRVKTTATLLTYLKSKARIMAVPDLAHTSCGIKQLEGVGLIDRDGTPLSSWSRNVDLSSFDSPDEETWIRLSEQQ------GSFDEQDEAYIGELLKSVQMVTDVMEALVKRVIMAESETAIEKEKVTLGQEEIKKKAIQIESMSSKLEEMEQFALGTNGILSEMRQRVEDLVEETSRQRQRAAENEQELCRVKRDFESLKSYVSSLISVRETLLSSEKQFQTIERLFERLVAKTSQLEGEKMQKEAEVQKLMEENVRLTALLDKKEAQLLAMNEQCKVMALSASNI

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
1214	85			14	0.994477
1337	77		22		1.0
1398		75		25	1.0
1408	77			22	1.0
1429	88		11		0.992527

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain