SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12504

Length: 638 nt

Origin of reads: Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene12504 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ARO1-like protein 2 n=1 Tax=Medicago truncatula RepID=B7FF18_MEDTR	-	-	55%
FL-Next	tr=ARO1-like protein 2; Medicago truncatula (Barrel medic) (Medicago tribuloides).	-	-	60%
Blast2go	protein	-	-	76%

Source	GOs	Term	Type	Identity
Blast2go	pollen tube growth	GO:0009860	Biological Process	76%
Blast2go	actin cytoskeleton organization	GO:0030036	Biological Process	76%
Blast2go	cytoplasm	GO:0005737	Cellular Component	76%
Blast2go	plasma membrane	GO:0005886	Cellular Component	76%
Blast2go	nucleus	GO:0005634	Cellular Component	76%
Blast2go	pollen tube tip	GO:0090404	Biological Process	76%

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	-
Sma3	Armadillo-like helical	IPR011989	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
211		25	75		0.996473
213	75			25	0.996473
214			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain