SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12341

Length: 702 nt

Origin of reads: Biogeco1 v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene12341 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb\|AAL38840.1\| unknown protein [Arabidopsis thaliana] gb\|AEE33400.1\| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]	-	-	4.0e-26	50%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	50%
Blast2go	nhl repeat-containing protein 2-like	-	-	6.37589e-32	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	6.37589e-32	68%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	6.37589e-32	68%
Blast2go	isomerase activity	GO:0016853	Molecular Function	6.37589e-32	68%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	6.37589e-32	68%

Source	InterPros	Term	Type	Identity
Sma3	LDLR class B repeat	IPR000033	-	-
Sma3	NHL repeat	IPR001258	-	-
Sma3	Haloacid dehalogenase/epoxide hydrolase	IPR005833	-	-
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	-
Sma3	HAD-superfamily hydrolase, subfamily IA, variant 3	IPR006402	-	-
Sma3	Six-bladed beta-propeller, TolB-like	IPR011042	-	-
Sma3		IPR012335	-	-
Sma3	NHL repeat, subgroup	IPR013017	-	-
Sma3	Redoxin	IPR013740	-	-
Sma3		IPR017936	-	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain