SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene11459

Length: 864 nt

Origin of reads: Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene11459

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF674 domain containing protein	-	-	1.0e-13	30%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	62%
Blast2go	uncharacterized protein loc100827142	-	-	0.0	50%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF674	IPR007750	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 41)

Position	A %	C %	G %	T %	Probability
377		33	66		1.0
380		28		71	1.0
381	71		28		1.0
385		28		71	1.0
386		28	71		1.0
387	71			28	1.0
388	71			28	1.0
391	71			28	1.0
393	57		14	28	1.0
396		28	71		1.0
398	14			85	0.993533
461	28		71		1.0
497		12	87		0.992554
501	12		87		0.992554
502	87	12			0.992554
503		12	87		0.992554
504	87			12	0.992554
505			87	12	0.992554
506	87		12		0.992554
507	87		12		0.992554
508	87	12			0.992554
511		87		12	0.992554
512	87	12			0.992554
514	87	12			0.992554
516		12	87		0.992554
517	12			87	0.992554
537	80	20			0.999996
539			80	20	0.999996
544		20		80	0.999996
553		20	80		0.999996
554	20			80	0.999996
557	10	10	60	20	0.999999
558	11		88		0.923564
564	88			11	0.923564
648	58		41		1.0
658	41		58		1.0
715			42	57	1.0
749		71	28		1.0
787	33		66		0.997452
791	66		33		0.997452
796	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain