SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene11339

Length: 735 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene11339

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	spore coat protein-like protein [Arabidopsis thaliana]	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	62%
Blast2go	multi-copper oxidase type i family protein	-	-	76%

Source	ECs	Term	Type	e value	Identity
Blast2go	Oxidoreductases, Acting on diphenols and related substances as donors, With oxygen as acceptor.	EC:1.10.3.-	-	0.0	76%

Source	KEGGs	Term	Type	Identity
Blast2go	Betalain biosynthesis	00965		76%
Blast2go	Metabolic pathways	01100		76%
Blast2go	Biosynthesis of secondary metabolites	01110		76%
Blast2go	Bilirubin oxidase.	EC:1.3.3.5	-	76%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Porphyrin and chlorophyll metabolism	00860		0.0	76%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	76%
Blast2go	root development	GO:0048364	Biological Process	76%
Blast2go	auxin polar transport	GO:0009926	Biological Process	76%
Blast2go	photomorphogenesis	GO:0009640	Biological Process	76%
Blast2go	meristem maintenance	GO:0010073	Biological Process	76%
Blast2go	response to auxin stimulus	GO:0009733	Biological Process	76%
Blast2go	indeterminate inflorescence morphogenesis	GO:0048283	Biological Process	76%
Blast2go	cellular response to phosphate starvation	GO:0016036	Biological Process	76%
Blast2go	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	GO:0016682	Molecular Function	76%
Blast2go	copper ion binding	GO:0005507	Molecular Function	76%
Blast2go	bilirubin oxidase activity	GO:0047705	Molecular Function	76%
Blast2go	cell wall	GO:0005618	Cellular Component	76%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	76%
Blast2go	membrane	GO:0016020	Cellular Component	76%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	76%
Blast2go	response to karrikin	GO:0080167	Biological Process	76%

Source	InterPros	Term	Type	Identity
Sma3	Multicopper oxidase, type 1	IPR001117	-	-
Sma3	Multicopper oxidase, copper-binding site	IPR002355	-	-
Sma3	Uncharacterised domain XH	IPR005379	-	-
Sma3	Cupredoxin	IPR008972	-	-
Sma3	Multicopper oxidase, type 2	IPR011706	-	-
Sma3	Multicopper oxidase, type 3	IPR011707	-	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
511		46		53	1.0
634		72	27		1.0
638			90	10	0.90298
640	87		12		0.992554
648	20			80	0.995493
649	20	80			0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain