SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene11073

Length: 753 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene11073 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam01189, Nol1_Nop2_Fmu, NOL1/NOP2/sun family	-	-	2.0e-15	29%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	30%
Blast2go	s-adenosyl-l-methionine-dependent methyltransferase domain-containing protein	-	-	0.0	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p	IPR001678	-	0.0	-
Sma3	ABC transporter, conserved site	IPR017871	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 42)

Position	A %	C %	G %	T %	Probability
455			87	12	0.992554
493	81		18		0.999994
497		81		18	0.999994
499			18	72	0.999994
502			18	81	0.999994
503		20		80	0.999996
507	20	70		10	0.999998
511	20		80		0.999996
512		20		80	0.999996
515		20		80	0.999996
520	20		80		0.999996
521	20	80			0.999996
524	20	80			0.999996
526	80		20		0.999996
590		11		88	0.923564
591		11	88		0.923564
592	11		88		0.923564
593	88			11	0.923564
606	87			12	0.992554
609	14			85	0.993533
612		16		83	0.994512
616		16		83	0.994512
617		16		83	0.994512
618	16	83			0.994512
621		83	16		0.994512
626	83		16		0.994512
628		33		66	1.0
629	83		16		0.994512
634		80	20		0.995493
637	20	80			0.995493
647			20	80	0.995493
648			80	20	0.995493
649		40		60	1.0
650	20	20	60		0.99255
651		40		60	1.0
652	20	60	20		0.99255
653	20	60		20	0.99255
655	75		25		0.996473
699	33			66	0.997452
700		33	66		0.997452
701	33		66		0.997452
702			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain