SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene10944

Length: 943 nt

Origin of reads: Biogeco1 v2 Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene10944 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	69%
Blast2go	phosphoglycerate mutase-like protein	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	78%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	78%
Blast2go	Riboflavin metabolism	00740		0.0	78%

Source	GOs	Term	Type	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	78%
Blast2go	ATP binding	GO:0005524	Molecular Function	78%
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	78%

Source	InterPros	Term	Type	Identity
Sma3	Histidine phosphatase superfamily, clade-2	IPR000560	-	-
Sma3	Homeobox protein, antennapedia type, conserved site	IPR001827	-	-
Sma3	ATP-grasp fold	IPR011761	-	-

Full-Lengther Next Prediction

SNPs (tot: 49)

Position	A %	C %	G %	T %	Probability
236	25	75			0.996473
289	25		75		0.996473
296	75		25		0.996473
340	90		10		0.90298
341	10		90		0.90298
344		90	10		0.90298
346		10		90	0.90298
350		10	90		0.90298
355		10		90	0.90298
428			11	88	0.923564
436			11	88	0.923564
437	88		11		0.923564
441	88	11			0.923564
442	88			11	0.923564
443		11	88		0.923564
449	87		12		0.992554
451	87	12			0.992554
453			12	87	0.992554
459	85			14	0.993533
460	85	14			0.993533
462	85	14			0.993533
463	85		14		0.993533
466	83		16		0.994512
474	20	80			0.995493
475	80		20		0.995493
477			20	80	0.995493
478	20			80	0.995493
481	80		20		0.995493
483		20		80	0.995493
486			20	80	0.995493
489		20		80	0.995493
493		14		85	0.993533
496		14		85	0.993533
675		87	12		0.992554
676	14			85	0.993533
680			14	85	0.993533
681	14	85			0.993533
683	14			85	0.993533
688			14	85	0.993533
689		85	14		0.993533
692	14			85	0.993533
694			14	71	0.984337
699		83	16		0.994512
714		20		80	0.995493
865	25		75		0.996473
872	75		25		0.996473
929		33		66	0.997452
930		33	66		0.997452
931	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain