SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene10657

Length: 1251 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene10657

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNW7_RICCO	-	-	62%
FL-Next	tr=ATP binding protein, putative; Ricinus communis (Castor bean).	-	-	65%
Blast2go	protein kinase domain-containing protein	-	-	74%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	74%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	74%
Blast2go	ATP binding	GO:0005524	Molecular Function	74%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	74%
Blast2go	plasma membrane	GO:0005886	Cellular Component	74%
Blast2go	cytosol	GO:0005829	Cellular Component	74%

Source	InterPros	Term	Type	Identity
Sma3	Creatinase	IPR000587	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Peptidase M24, structural domain	IPR000994	-	-
Sma3	ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter	IPR001757	-	-
Sma3	Ankyrin repeat	IPR002110	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Retrotransposon gag protein	IPR005162	-	-
Sma3	ATPase, P-type, plasma-membrane proton-efflux	IPR006534	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9SNW7

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 422 aas, your sequence is shorter than subject: 361 - 1102

Fln protein: ACKDLVTMEERSDKEHVSLHMLTSQGSIEQENLESLEIMVTPGKTSEELPRLPPVRLKSEERNPNFSQEGLDKEENPDRTGSTAKAMNMEASFLLGSFLDVPVGQEITSSGGKRTMGSSRLSVSQGIAEDASELVSGQATVGDGLSESVDYPNEYWDSDEYEDDDDLGYIRQPIEDETWFLAHEIDYPSDNEKGTGHGSIPDQQDRDGGKGEEDDQSFVEEDSYFSGEQYFPSKNIEQIASSDDPVGQSTTEMYGRSDDNDLIAQYDGQLMDEEELNLMRAEPVWQGFVTQNNELVMLGSERVMSDLEQPRPDDFGIDDDQHGSVRSIGVGIHSDVADFGSEVRESLYTRELLKMEEKWL*

Protein Length: 362

Fln nts: GCATGCAAAGATTTAGTGACCATGGAAGAGAGATCAGACAAGGAGCATGTGTCTTTACACATGCTAACCTCCCAAGGAAGTATTGAGCAAGAAAATTTGGAGAGTCTAGAGATAATGGTTACTCCAGGAAAGACTTCAGAGGAGCTCCCAAGGTTGCCACCTGTCAGGCTTAAGTCAGAGGAGAGGAACCCAAACTTTTCACAGGAAGGGCTTGATAAGGAAGAAAATCCAGATCGAACAGGATCTACTGCAAAGGCAATGAACATGGAGGCTTCATTTCTATTGGGATCATTTTTGGATGTGCCTGTTGGCCAGGAAATTACATCTTCAGGTGGAAAGCGTACGATGGGAAGCAGTCGACTGTCCGTAAGTCAGGGCATTGCTGAGGATGCTTCTGAACTTGTTTCTGGCCAAGCTACCGTTGGTGATGGCTTGAGTGAGTCTGTTGATTATCCAAACGAGTATTGGGATTCTGATGAATATGAGGATGATGATGACCTGGGATACATCAGGCAGCCCATAGAAGACGAGACCTGGTTTTTAGCTCATGAGATAGATTATCCCAGTGACAATGAAAAAGGAACTGGACATGGCAGTATTCCAGATCAGCAAGACAGAGATGGTGGAAAGGGCGAGGAGGATGACCAATCTTTTGTAGAAGAAGATTCGTACTTTTCGGGTGAACAATATTTTCCATCCAAGAATATTGAACAAATAGCCAGTTCAGATGACCCAGTAGGACAATCTACAACTGAGATGTATGGAAGAAGTGATGACAATGACTTAATAGCTCAATATGATGGGCAGTTGATGGATGAAGAGGAGTTGAACTTGATGAGAGCAGAACCTGTGTGGCAAGGTTTTGTTACACAAAACAATGAGCTTGTAATGTTAGGCAGTGAGAGGGTTATGAGTGATCTAGAGCAGCCACGGCCAGATGACTTTGGCATTGACGATGATCAACATGGATCGGTGAGGTCTATTGGTGTAGGGATTCATAGTGATGTGGCTGACTTTGGCAGTGAAGTGAGAGAAAGCCTGTATACAAGGGAGCTGCTCAAGATGGAAGAGAAATGGCTGTGAAGCTGCTTTCCTTAAATTCTTTGAAAAGGAGGAGAGAATTTATGATTAAAGTTAAGCTCATCGCCAGAATTCAGCACGAAATCTTGTGAACCTGCTAGCATGTAATAGGAACATTAATAAAACCTTAACCAAAGTGTATGTGAAATATTTTCATATATAAATCCTAAC

Fln Alignment:

Contig10657___VTMEERSDKEHVSLHMLTSQGSIEQENLESLEIMVTPGKTSEELPRLPPVRLKSEERNPNFSQEGLDKEENPDRTGSTAKAMNMEASFLLGSFLDVPVGQEITSSGGKRTMGSSRLSVSQGIAEDASELVSGQATVGDGLSESVDYPNXXXXXXXXXXXXXLGYIRQPIEDETWFLAHEIDYPSDNEKGTGHGSIPDQQDRDGGKGEEDDQSFVEEDSYFSGEQYFPSKNIEQIASSDDPVGQSTTEMYGRSDDNDLIAQYDGQLMDEEELNLMRAEPVWQGFVTQNNELVMLGSERVMSDLEQPRPDDFGIDDDQHGSVRSIGVGIHSDVADFGSEVRESL
B9SNW7_______________VAIKEQVDEVGRALYFGKSQGNLEQKNSAGLSFSLASDNPKEEFPRLPPVKLKSEDKPLN-----VNWQEKFERDGPGGKHSSADNTFLIGSYLDVPIGQEINSSGGKRVAGGSWLSVSQGIAEDTSDLVSGFATIGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTVHGSVPDPQERGPTKDEDDDQSFAEEDSYFSGEQYFQSKAVEPITASEDPIGLSVTEMYRRSDENDLIAQYDGQLMDEEELNLMRSEPVWQGFVTQTNELIMLGDGKALNDSGRPRLDDICVDDDQHGSVRSIGVGINSDAADFGSEIRESL

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
301	25		75		0.996473
305		75	25		0.996473
306			25	75	0.996473
427			85	14	0.993533
462		85		14	0.993533
465			85	14	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain