SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene10455

Length: 839 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene10455

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Putative poly [ADP-ribose] polymerase 3 n=1 Tax=Medicago truncatula RepID=PARP3_MEDTR	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	37%
Blast2go	poly	-	-	75%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.4.2.3-	-	0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	protein ADP-ribosylation	GO:0006471	Biological Process	75%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	75%
Blast2go	DNA binding	GO:0003677	Molecular Function	75%
Blast2go	NAD+ ADP-ribosyltransferase activity	GO:0003950	Molecular Function	75%
Blast2go	nucleus	GO:0005634	Cellular Component	75%

Source	InterPros	Term	Type	Identity
Sma3	BRCT domain	IPR001357	-	-
Sma3	Zinc finger, PARP-type	IPR001510	-	-
Sma3	DNA-binding SAP	IPR003034	-	-
Sma3	Poly(ADP-ribose) polymerase, regulatory domain	IPR004102	-	-
Sma3	NAD+ ADP-ribosyltransferase	IPR008288	-	-
Sma3	WGR domain	IPR008893	-	-
Sma3	Poly(ADP-ribose) polymerase, catalytic domain	IPR012317	-	-
Sma3	PADR1	IPR012982	-	-
Sma3	Ribosomal protein S14, conserved site	IPR018271	-	-

Full-Lengther Next Prediction

SNPs (tot: 51)

Position	A %	C %	G %	T %	Probability
134		75	25		0.996473
135			25	75	0.996473
266		16		83	0.994512
267			16	83	0.994512
272	14	85			0.993533
273		85		14	0.993533
275		71	14	14	0.984337
280		85	14		0.993533
283			85	14	0.993533
284		14	85		0.993533
286		14		71	0.984337
287	71		14	14	0.984337
293		14		85	0.993533
294	14			85	0.993533
295		12	87		0.992554
296			87	12	0.992554
297		12		87	0.992554
346		11		88	0.923564
347			11	88	0.923564
348		88		11	0.923564
350	88		11		0.923564
354		11	88		0.923564
363	87			12	0.992554
364	87		12		0.992554
365		87		12	0.992554
370	87			12	0.992554
371		12	87		0.992554
372	12		87		0.992554
388	90	10			0.90298
391		10	90		0.90298
393		90		10	0.90298
394	90		10		0.90298
395	10			90	0.90298
397	90	10			0.90298
398		90		10	0.90298
402		11	88		0.923564
403	88			11	0.923564
405	88			11	0.923564
406		11	88		0.923564
408	88			11	0.923564
409	88	11			0.923564
410	11		88		0.923564
440	87			12	0.992554
442	87		12		0.992554
443	87	12			0.992554
448	87		12		0.992554
450			12	87	0.992554
452		12	87		0.992554
456	86	13			0.999973
457		14	85		0.999981
460	85			14	0.999981

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain