SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9849

Length: 583 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9849

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO	-	-	4.0e-05	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%
Blast2go	unknown [Picea sitchensis]	-	-	3.21293e-22	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	DNA topoisomerase (ATP-hydrolyzing).	EC:5.99.1.3	-	3.21293e-22	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	DNA topological change	GO:0006265	Biological Process	3.21293e-22	87%
Blast2go	DNA topoisomerase (ATP-hydrolyzing) activity	GO:0003918	Molecular Function	3.21293e-22	87%
Blast2go	ATP binding	GO:0005524	Molecular Function	3.21293e-22	87%
Blast2go	chromosome	GO:0005694	Cellular Component	3.21293e-22	87%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
103		25		75	0.996473
301		57		42	1.0
310	28		71		1.0
313	37		62		1.0
583	14			85	0.993533
584		85		14	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain