SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9570

Length: 1349 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9570

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	GDSL-lipase 1 [Capsicum annuum]	-	-	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	46%
Blast2go	protein	-	-	70%

Source	ECs	Term	Type	e value	Identity
Blast2go	Carboxylesterase.	EC:3.1.1.1	-	0.0	70%

Source	KEGGs	Term	Identity
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	70%
Blast2go	Drug metabolism - other enzymes	00983	70%
Blast2go	Metabolic pathways	01100	70%
Blast2go	Biosynthesis of secondary metabolites	01110	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	carboxylesterase activity	GO:0004091	Molecular Function	0.0	70%

Source	InterPros	Term	Type	Identity
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	Zinc finger-XS domain	IPR005381	-	-
Sma3	Lipase, GDSL, active site	IPR008265	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P254

Fln msg:

Fln protein: MGIKCLNSKAAPWLPCLAFVVTYCCVGVISGEAAPEVTAMFIFGDSLIDNGNNNYIASIAKANFLPYGIDFLGGRPTGRFCNGRTTVDFLGQLLGLPLIPAYLDPSTRGSAILNGVNYASAAAGILDETGQNLIGRISFNQQIANFGKTLEDLTSQLGSAVAVAQHLSKSIFSITFGSNDYINNYLMPAFYPTSRQYTPEAYSDILMWQLSQQLVALYNLGARKFAVAAMGPLGCIPSQIAMSNSNGSCIDSVNQHAILFNSKLKYLLGTLSLNMPGAHCVYGDAYSAVKDMIDDPSSYGFSVTNQGCCGIGMYNGQITCLPGLEPCTNRDQHVFWDAFHPTEAVNIILATRAYSGPPSDSYPINLKQLAQI*

Protein Length: 374

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTTCAGCTGGGGGTCTTGGCAACTTATTTCATCTAATTTATTTCTGCTACTCTATGCTCGTTTAGAGTAATATTTGACATATTTGAGGCTCTACAGTG_-_ATGGGAATCAAGTGTTTAAATTCCAAGGCAGCTCCATGGCTCCCCTGTTTAGCTTTTGTTGTTACATATTGTTGTGTTGGAGTGATTTCTGGGGAGGCCGCGCCTGAAGTTACAGCCATGTTTATATTCGGCGATTCTCTGATCGATAATGGCAACAACAACTATATAGCAAGCATTGCCAAAGCCAACTTCTTGCCTTATGGAATAGATTTCCTTGGAGGCCGTCCTACTGGAAGGTTTTGCAATGGCAGGACGACTGTTGATTTTCTAGGGCAATTGCTAGGGCTGCCTCTCATTCCTGCATACCTTGACCCATCTACAAGGGGTTCGGCAATCCTAAATGGAGTGAACTACGCTTCAGCAGCCGCAGGCATTTTGGACGAGACTGGCCAAAACCTTATTGGGCGCATATCGTTCAATCAACAGATTGCAAATTTCGGGAAGACTTTAGAGGATTTGACATCGCAGTTGGGAAGCGCAGTGGCGGTGGCTCAGCATCTATCAAAATCTATTTTCTCAATTACTTTTGGGAGCAACGATTATATCAACAACTATCTTATGCCTGCCTTTTATCCAACCAGTAGACAATACACCCCAGAGGCTTATAGCGATATTCTCATGTGGCAACTTTCACAACAACTGGTGGCTCTATACAACTTGGGAGCTCGCAAATTCGCAGTGGCAGCAATGGGTCCTCTGGGATGCATTCCAAGTCAAATAGCAATGTCCAATAGCAATGGCAGCTGCATTGACAGTGTAAACCAACACGCCATACTCTTCAATTCCAAGCTCAAATATCTTTTGGGCACGCTGTCACTCAATATGCCTGGTGCACATTGCGTCTATGGAGATGCCTACAGTGCAGTTAAAGACATGATCGACGATCCCAGTTCTTATGGTTTTAGTGTGACAAATCAAGGATGCTGTGGGATAGGCATGTATAATGGACAGATAACGTGCCTTCCGGGACTGGAACCGTGTACCAACAGAGACCAGCATGTATTTTGGGACGCATTCCATCCCACTGAAGCTGTGAACATTATTCTGGCCACAAGAGCTTACTCCGGCCCTCCTTCTGACTCTTACCCCATCAATCTCAAGCAGCTTGCTCAGATATAA___TAAGGTTCACATTAACTTTCTGGACAGTCAAATGTCTCTGCTTCTTAAAATATTTTCATTTTGTTATCAGCAGAGCATAATATACCTGTAGTCAAGTTACGAATTT

Fln Alignment:

Contig9570___TAMFIFGDSLIDNGNNNYIA-SIAKANFLPYGIDFLGGRPTGRFCNGRTTVDFLGQLLGLPLIPAYLDPSTRG--SAILNGVNYASAAAGILDETGQNLIGRISFNQQIANFGKTLEDLTSQLGSAVAVAQHLSKSIFSITFGSNDYINNYLMPAFYPTSRQYTPEAYSDILMWQLSQQLVALYNLGARKFAVAAMGPLGCIPSQIAMSNSNGSCIDSVNQHAILFNSKLKYLLGTLSLNMPGAHCVYGDAYSAVKDMIDDPSSYGFSVTNQGCCGIGMYNGQITCLPGLEPCTNRDQHVFWDAFHPTEAVNIILATRAYSGP
A9P254______________TLFFSFGDSLIDVGNNNYLTYCLAKSNFPWYGMDYNGGIPTGRFTNGRTIIDIVAEKLGLDSSPAYLSLSNTSDDTVMLKGVNYASGGAGILDETGLLFIEKIPFDNQIDHFQATKKSLTKKIG-AVAAENLLNEAIYFVVIGSNDYINNYLLPVNVTNAQQQTPHQFKVLLITSLREQFKRIYQLGARKILFNGIGPLGCIPAQRA--KNGGACLEDVNRWVQKFNVNIQKLLSELNSELPGVKINYVDSYSGVMKLIQNPGAYGFSVSDTPCCNVDTNFGQL-CLPNSNVCSDRSQYVFWDAFHPTDAANVVLADMFISKP

SNPs (tot: 71)

Position	A %	C %	G %	T %	Probability
153	80	20			0.995493
155			80	20	0.995493
157	80		20		0.995493
158			80	20	0.995493
159		80	20		0.995493
160	20			80	0.995493
163	80			20	0.995493
174		80		20	0.995493
176	20			80	0.995493
332		10		90	0.90298
334			90	10	0.90298
335	90	10			0.90298
336	90		10		0.90298
339		10	90		0.90298
340	90	10			0.90298
343			10	90	0.90298
344		88	11		0.923564
347			11	88	0.923564
348			88	11	0.923564
349		11	88		0.923564
351		11	88		0.923564
352			88	11	0.923564
354	11	88			0.923564
403		11	88		0.923564
405		88		11	0.923564
406	88	11			0.923564
407	88		11		0.923564
409			11	88	0.923564
410	11		88		0.923564
412		11		88	0.923564
413	88			11	0.923564
414			88	11	0.923564
420		88		11	0.923564
422	11			88	0.923564
434	90			10	0.90298
436	90	10			0.90298
437		90	10		0.90298
542		12		87	0.992554
543	87		12		0.992554
548			12	87	0.992554
549	12	87			0.992554
550	87	12			0.992554
551	87	12			0.992554
553		87		12	0.992554
554	87		12		0.992554
555	87		12		0.992554
557	87			12	0.992554
561		12		87	0.992554
562	12		87		0.992554
564	87	12			0.992554
745	83	16			0.994512
746			16	83	0.994512
748		83	16		0.994512
749	16			83	0.994512
751	83	16			0.994512
759	80			20	0.995493
760		80	20		0.995493
762		20		80	0.995493
763	20			80	0.995493
765	80			20	0.995493
932			94	1	0.999831
934	1	93		5	1.0
935			93	6	1.0
938	94		5		1.0
939		95	4		0.99997
941		1		94	0.999831
942	4			94	0.999831
943		4	94		0.999831
1344			83	16	0.994512
1347	83		16		0.994512
1348	83	16			0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain