SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9406

Length: 1480 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9406

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	purple acid phosphatase 28 [Arabidopsis thaliana] sp\|Q9LU72.1\|PPA28_ARATH RecName: Full=Probable inactive purple acid phosphatase 28; Flags: Precursor dbj\|BAA97364.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAM97046.1\| putative protein [Arabidop	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	63%
Blast2go	protein	-	-	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	72%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	72%
Blast2go	Riboflavin metabolism	00740		0.0	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	0.0	72%
Blast2go	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	0.0	72%

Source	InterPros	Term	Type	Identity
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Phosphoesterase At2g46880	IPR011230	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NXQ3

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 364 - 389

Fln protein: FMITNH*SPK*LPTLPLRFNENGQFKILQVADMHYANGAVTRCEDVLPSEFPSCSDLNTSAFLTRMIQSEKPDFIVFTGDNIYGPDSADAADSMDAAFAPAIKSKLPWAAVLGNHDQESTMTREELMLYLSVMDYSISKVNPLSDNPSDRQRFTVDGFGNYNIEVKGALGSELENKSVFNLYFLDSGDKSTVPGISGYGWIKESQQAWLRDVSALLQDTYKRGRAPQTDPAPALGFFHIPLYEVRYLGGSEIVGEMQEGVGCASINSGVLSTFVSTGDIKAVFTGHDHVNDFCGKYEGIWLCYGGGFGYHAYGKAGWSRRARVIMATLEKGEKTWQGVTSIKTWKRLDDTTFTKIDEQTLWSK*

Protein Length: 365

Fln nts: GGTTTATGATAACCAATCATTAGTCTCCCAAATAACTGCCCACTCTGCCGCTTCGTTTCAATGAGAATGGCCAGTTCAAAATCCTTCAGGTTGCTGATATGCATTATGCAAACGGAGCAGTCACACGATGCGAAGATGTTTTACCTTCTGAGTTCCCTTCTTGTTCAGATCTCAACACTTCTGCATTTCTCACTAGGATGATCCAGTCCGAGAAGCCGGATTTCATTGTATTTACAGGAGACAACATCTATGGACCGGATTCCGCTGACGCTGCCGATTCTATGGATGCTGCATTTGCTCCTGCAATAAAATCCAAGCTTCCTTGGGCAGCAGTATTGGGTAATCATGACCAAGAATCTACCATGACCCGTGAAGAGCTGATGCTGTATTTATCTGTCATGGATTACTCCATTTCCAAGGTCAATCCTCTTTCTGATAATCCAAGTGACAGGCAGAGATTTACAGTTGATGGTTTTGGAAATTATAATATAGAAGTTAAAGGTGCTTTGGGTTCAGAGCTAGAGAACAAGAGTGTTTTCAATCTTTATTTTCTGGATAGCGGTGATAAGTCGACTGTTCCTGGAATTTCTGGCTATGGGTGGATCAAAGAAAGCCAGCAGGCTTGGCTCCGAGATGTTTCTGCACTATTACAGGATACATATAAAAGGGGACGGGCTCCACAGACTGATCCAGCTCCAGCTCTTGGCTTTTTCCATATTCCTCTGTATGAGGTACGGTACCTTGGAGGTTCAGAAATTGTGGGTGAAATGCAGGAAGGAGTGGGTTGTGCTTCCATAAACTCAGGTGTCTTGAGCACTTTTGTAAGTACTGGGGACATCAAGGCAGTCTTCACAGGTCACGACCATGTCAATGATTTTTGTGGGAAATATGAGGGAATTTGGCTGTGTTATGGGGGTGGATTTGGCTACCATGCTTATGGAAAAGCAGGATGGTCAAGACGAGCCAGAGTGATTATGGCTACTCTTGAAAAAGGTGAAAAAACATGGCAAGGTGTTACAAGTATAAAAACTTGGAAACGCTTAGATGATACAACATTTACTAAAATTGATGAACAGACACTATGGAGCAAATAG___TTGAAGGTAGGTCTGTTAAAGCTCAGTTCAAGCTCTGCAGTGGTGTGTCACTGGTCCGTTAATCTTTTGGGCAGTCACAAAAGTTCAGAACCCAGAATGACTTATTTTTCATGTTTAGGTTGGCAGTTTTGTTCTTAAGAAATCCAAGTGATATGTTCTTAAGAGGACTATACCTTCAACACAGATGCAAACAGGGACAGAGAGGCATGAATGAACTGCCCGGAATTCATATGACCTCTACCATTTCTGTACATTATATAACACCCTATCAATCTGCTAAAGGCTCTGTTCTGGACACCAGTGGGTGTGAAATATTATCGTGGATGCTAATATATGTATTTTAATTTAATCGGTGAAGCTGTTATCTCCAATAAGTTATGATTATG

Fln Alignment:

Contig9406___K*LPTLPLRFNEN-GQFKILQVADMHYANGAVTRCEDVLPSEFPSCSDLNTSAFLTRMIQSEKPDFIVFTGDNIYGXXXXXXXXXXXXXXXXXIKSKLPWAAVLGNHDQESTMTREELMLYLSVMDYSISKVNPLSDNPSDRQRFTVDGFGNYNIEVKGALGSELENKSVFNLYFLDSGDKSTVPGISGYGWIKESQQAWLRDVSALLQDTYKRGRAPQTDPAPALGFFHIPLYEVRYLGGSEIVGEMQEGVGCASINSGVLSTFVSTGDIKAVFTGHDHVNDFCGKYEGIWLCYGGGFGYHAYGKAGWSRRARVIMATLEKGEK-TWQGVTSIKTWKRLDDTTFTKIDEQT
A9NXQ3______________KSVPLPPLRFKSTIGKFKILQVADMHYADGQSTKCEDVLPSQFSTCSDLNTTDFVKRMIKAEKPDFIVFTGDNIYGVDAKDAATSLKAAFEPAISAKLPWAAVLGNHDQESTLTRKQVMKHIVPMEYTLSKVNPHGKK--------IDGFGNYNLEVKGMKGSKLEGKSVLNLYFLDSGDYSTDPNITGYDWIKASQQAWFKETSAKLQKNYKSNPSAQSESAPGLVYFHIPLPEVKIFGSSSIIGVKQEPISCPLYNSGFLETMVQAEDVKAAFTGHDHKNDFCGKLRGIELCYAGGFGYHAYGKAGWSRRSRVVVASLEKDIKGGWKGVQSITTWKRLDDEHLSKIDTQT

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
708		14		85	0.993533
779	81		18		0.999994
873	10		90		0.90298
951		10		90	0.90298
1103	90		10		0.90298
1196		12		87	0.992554
1212			80	20	0.995493

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain