SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9043

Length: 818 nt

Origin of reads: Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9043

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CCR4-NOT transcription complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SW63_RICCO	-	-	3.0e-16	59%
FL-Next	sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	49%
Blast2go	probable not transcription complex subunit vip2-like	-	-	2.8186e-18	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	plastid	GO:0009536	Cellular Component	2.8186e-18	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	NOT2/NOT3/NOT5	IPR007282	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
135	33			66	0.997452
137		66		33	0.997452
472			66	33	0.997452
475	66		33		0.997452
487		66		33	0.997452

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain