SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene8892

Length: 1155 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene8892

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peptide deformylase [Arabidopsis thaliana]	-	-	1.0e-11	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	peptide deformylase 1b	-	-	2.05896e-30	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peptide deformylase.	EC:3.5.1.88	-	2.05896e-30	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	translation	GO:0006412	Biological Process	2.05896e-30	77%
Blast2go	iron ion binding	GO:0005506	Molecular Function	2.05896e-30	77%
Blast2go	peptide deformylase activity	GO:0042586	Molecular Function	2.05896e-30	77%
Blast2go	chloroplast	GO:0009507	Cellular Component	2.05896e-30	77%
Blast2go	mitochondrion	GO:0005739	Cellular Component	2.05896e-30	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Formylmethionine deformylase	IPR000181	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	G %	T %	Probability
817		14	85	0.993533
828	40	60		1.0
830	20		60	0.99255
832		40	60	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain