SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene8877

Length: 883 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene8877

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[H] COG0285 Folylpolyglutamate synthase	-	-	6.0e-40	31%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	70%
Blast2go	folylpolyglutamate mitochondrial-like	-	-	0.0	69%

Source	ECs	Term	Type	e value	Identity
Blast2go	Tetrahydrofolate synthase.	EC:6.3.2.17	-	0.0	69%

Source	KEGGs	Term	Identity
Blast2go	Folate biosynthesis	00790	69%
Blast2go	Biosynthesis of phenylpropanoids	01061	69%
Blast2go	Metabolic pathways	01100	69%

Source	GOs	Term	Type	Identity
Blast2go	root hair elongation	GO:0048767	Biological Process	69%
Blast2go	root meristem growth	GO:0010449	Biological Process	69%
Blast2go	one-carbon metabolic process	GO:0006730	Biological Process	69%
Blast2go	tetrahydrofolylpolyglutamate biosynthetic process	GO:0046901	Biological Process	69%
Blast2go	tetrahydrofolylpolyglutamate synthase activity	GO:0004326	Molecular Function	69%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	69%

Source	InterPros	Term	Type	Identity
Sma3	Folylpolyglutamate synthetase	IPR001645	-	-
Sma3	Mur ligase, C-terminal	IPR004101	-	-
Sma3	Exostosin-like	IPR004263	-	-
Sma3	Mur ligase, central	IPR013221	-	-
Sma3	Folylpolyglutamate synthetase, conserved site	IPR018109	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6HNT5

Fln msg: Overlapping hits, possible frame ERROR between 290 and 278, Distance to subject end: 198 aas, your sequence is shorter than subject: 294 - 555

Fln protein: CAFSESILRACGFRTGLFTSPHLIDLCERYRIDGLEISQEKFLANFWWCWDRLKDNCTKDVPMPNYFRLLTLVAFKIFTSEKVDVVILEVGxxxxxxATNAVKSPIVCGISSLGFDHMEILGNTLSQIAGEKAGIFKPGVPAITVPQPEEAMKVLRDTSSHLSIPLQLASPLDATTLGGLKLSLAGDHQYINAGLAVALCRTWLSRTGHSDLLESVDDDRYLPKPFIKGLVTTNFPGRSQVIRDPYTRSFQQHSEGEAGIADAGELCFYLDGAHSPESMDECAKWFSQAIKKDI

Protein Length: 295

Fln nts: CATGTGCATTTTCAGAGAGCATATTGCGAGCATGTGGCTTTCGAACAGGACTCTTCACATCCCCTCATCTTATTGATCTTTGTGAAAGATATCGAATAGATGGATTGGAAATATCTCAAGAAAAGTTTCTGGCAAACTTTTGGTGGTGTTGGGACCGGTTGAAGGATAATTGTACGAAGGATGTGCCTATGCCTAATTATTTCCGCCTCCTTACTCTAGTAGCATTCAAGATATTTACATCAGAGAAGGTGGATGTTGTGATTTTGGAAGTAGGTxxxxxxxxxxxxxxxxxxGCAACAAATGCGGTAAAGTCGCCTATCGTTTGTGGGATATCTTCTTTGGGGTTTGATCATATGGAGATTCTAGGAAACACTCTCTCACAAATTGCTGGAGAGAAGGCTGGAATTTTCAAGCCTGGAGTTCCTGCTATTACTGTACCTCAACCTGAAGAGGCAATGAAAGTTCTCCGGGATACATCCTCTCACTTATCGATTCCTCTCCAATTAGCATCACCATTAGATGCTACTACACTGGGTGGTTTGAAGCTAAGCTTGGCTGGTGATCATCAGTATATAAATGCAGGCCTAGCTGTTGCCCTGTGTCGTACTTGGCTTAGCAGAACTGGACATTCTGATCTGTTGGAGAGTGTAGATGATGACAGATACTTGCCAAAGCCCTTCATTAAAGGGCTCGTCACAACCAATTTTCCAGGTCGTTCACAGGTTATTCGTGATCCATATACAAGATCTTTTCAACAGCATAGTGAGGGAGAAGCTGGAATTGCTGATGCTGGTGAGCTGTGTTTCTATTTGGATGGAGCACACAGTCCAGAAAGCATGGACGAATGTGCAAAGTGGTTTTCACAAGCTATAAAAAAGGACATT

Fln Alignment:

Contig8877___CAFSESILRACGFRTGLFTSPHLIDLCERYRIDGLEISQEKFLANFWWCWDRLKDNCTKDVPMPNYFRLLTLVAFKIFTSEKVDVVILEVGLxxxxDATNAVKSPIVCGISSLGFDHMEILGNTLSQIAGEKAGIFKPGVPAITVPQPEEAMKVLRDTSSHLSIPLQLASPLDATTLGGLKLSLAGDHQYINAGLAVALCRTWLSRTGHSDLLESVDDDRYLPKPFIKGLVTTNFPGRSQVIRDPYTRSFQQHSEGEAGIADAGELCFYLDGAHSPESMDECAKWFSQAIKKD
F6HNT5______________CTFTESILRNCGFRTGLFTSPHLIDVRERFRLDGVEICEEKFLAYFWWCWDRLKEKTDEDVPMPTFFHFIALLAFKIFAAEQVDVVILEVGLxxxxDATNVVQEPIVCGITSLGYDHMEILGHTLGEIAGEKAGIFKRGVPAFTVPQPEEAMCVLEAKASQLDVPLQVIPPMDASLLNGLKLGLEGEHQYLNAGLAIALCSTWLQRTSHLE-INYLEQTSSLPEQFIKGLTTASLQGRAQIVPDRC-----------INIESPGDLVFYLDGAHSPESMEICARWFSLAIKED

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain