SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene8646

Length: 676 nt

Origin of reads: Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene8646

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Beta-glucosidase n=1 Tax=Rosa hybrid cultivar RepID=B1B611_ROSHC	-	-	1.99993e-41	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	beta-glucosidase d2	-	-	0.0	64%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Glycosylases, Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.	EC:3.2.1.-	-	0.0	64%

Source	KEGGs	Term	Identity
Blast2go	Ascorbate and aldarate metabolism	00053	64%
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	64%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	64%
Blast2go	Glycosaminoglycan degradation	00531	64%
Blast2go	Metabolic pathways	01100	64%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	64%
Blast2go	hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	Molecular Function	64%
Blast2go	cation binding	GO:0043169	Molecular Function	64%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	64%

Source	InterPros	Term	Type	Identity
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Glycoside hydrolase, family 1	IPR001360	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Glycoside hydrolase, family 1, active site	IPR018120	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	Probability
267	75	25		0.996473
343	11	88		0.923564
368	75		25	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain