SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene8364

Length: 1070 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene8364

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	0.0	52%
Blast2go	insulin-degrading enzyme-like	-	-	1.52633e-31	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	metal ion binding	GO:0046872	Molecular Function	1.52633e-31	70%
Blast2go	catalytic activity	GO:0003824	Molecular Function	1.52633e-31	70%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 32	IPR001362	-	-
Sma3	Peptidase M16, zinc-binding site	IPR001431	-	-
Sma3	Peptidase M16, C-terminal	IPR007863	-	-
Sma3	Peptidase M16, core	IPR011237	-	-
Sma3	Peptidase M16, N-terminal	IPR011765	-	-
Sma3	Glycosyl hydrolases family 32, N-terminal	IPR013148	-	-

Full-Lengther Next Prediction

SNPs (tot: 59)

Position	A %	C %	G %	T %	Probability
290	75			25	0.996473
291	75		25		0.996473
292			25	75	0.996473
293	75		25		0.996473
316		50		50	1.0
362			87	12	0.992554
363		87	12		0.992554
364	87		12		0.992554
365			12	87	0.992554
416	12		87		0.992554
420		87		12	0.992554
450		14		85	0.993533
474	71		28		1.0
489			85	14	0.993533
498	88		11		0.923564
508		88	11		0.923564
509	88		11		0.923564
510	87	12			0.992554
511	87			12	0.992554
513		87		12	0.992554
515	88		11		0.923564
517	66	22		11	0.999999
518	87		12		0.992554
520		87	12		0.992554
531		8	25	66	1.0
535	8	66		25	1.0
536	75		25		1.0
537	25			75	1.0
538		25		75	1.0
539		25		75	1.0
542		75	25		1.0
543	75	25			1.0
547	25			75	1.0
563	85		14		0.999981
565			14	85	0.999981
569		13	6	80	0.999961
571		80	6	13	0.999961
572	86		13		0.999973
575	80	6			0.999961
577			13	86	0.999973
578			86	13	0.999973
581		13	86		0.999973
816		33		66	1.0
870	89			10	0.999919
900			88	11	0.999952
970			25	75	1.0
975		25	62	12	1.0
985	12		87		0.992554
986		87	12		0.992554
990	12		87		0.992554
991		12		87	0.992554
992	12			87	0.992554
994	12	87			0.992554
995			12	87	0.992554
997		75		12	0.975346
1002	87	12			0.992554
1003			87	12	0.992554
1006	12			87	0.992554
1008	14			85	0.993533

SSRs (tot: 1)

Start position	End position	Sequence	Length
1023	1036	TTAT TTAT TTAT TT	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain