SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene8140

Length: 988 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene8140

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glutathione-S-transferase n=4 Tax=Picea RepID=Q2Q9T2_PICMA	-	-	83%
FL-Next	tr=Glutathione-S-transferase; Picea mariana (Black spruce) (Abies mariana).	-	-	87%
Blast2go	tau class glutathione s-transferase	-	-	76%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glutathione transferase.	EC:2.5.1.18	-	0.0	76%

Source	KEGGs	Term	Identity
Blast2go	Glutathione metabolism	00480	76%
Blast2go	Metabolism of xenobiotics by cytochrome P450	00980	76%
Blast2go	Drug metabolism - cytochrome P450	00982	76%

Source	GOs	Term	Type	Identity
Blast2go	toxin catabolic process	GO:0009407	Biological Process	76%
Blast2go	glutathione transferase activity	GO:0004364	Molecular Function	76%
Blast2go	enzyme binding	GO:0019899	Molecular Function	76%
Blast2go	chloroplast	GO:0009507	Cellular Component	76%
Blast2go	nucleus	GO:0005634	Cellular Component	76%
Blast2go	apoplast	GO:0048046	Cellular Component	76%
Blast2go	regulation of response to red or far red light	GO:2000030	Biological Process	76%

Source	InterPros	Term	Type	Identity
Sma3	Glutathione S-transferase, N-terminal	IPR004045	-	-
Sma3	Glutathione S-transferase, C-terminal	IPR004046	-	-
Sma3	Glutathione S-transferase, C-terminal-like	IPR010987	-	-
Sma3		IPR012335	-	-
Sma3	Glutathione S-transferase/chloride channel, C-terminal	IPR017933	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
271		50		50	1.0
551			25	75	0.996473
552			25	75	0.996473
553			25	75	0.996473
694	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain