SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene8131

Length: 854 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene8131

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to haloacid dehalogenase-like hydrolase domain containing 4 [Canis familiaris]	-	-	2.0e-15	30%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Blast2go	novel protein n-acetylneuraminic acid phosphatase ( zgc:111947)	-	-	0.0	59%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoglycolate phosphatase.	EC:3.1.3.18	-	0.0	59%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glyoxylate and dicarboxylate metabolism	00630		0.0	59%
Blast2go	Metabolic pathways	01100		0.0	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	0.0	59%
Blast2go	phosphoglycolate phosphatase activity	GO:0008967	Molecular Function	0.0	59%

Source	InterPros	Term	Type	e value	Identity
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	0.0	-
Sma3	HAD-superfamily hydrolase, subfamily IA, variant 1	IPR006439	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
613	85		14		0.993533
616	14		85		0.993533
617		14		85	0.993533
620	85		14		0.993533
621	85		14		0.993533
622	85	14			0.993533
630	14	85			0.993533
674		33		66	1.0
780	50			50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain